Sequence details bmy_03574 (Coding sequence)

Part of scaffold_106 (Scaffold)

For more information consult the page for scaffold_106 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PSEN1 ENSBTAG00000011757 (Cow)

Gene Details

Presenilin-1 Presenilin-1 NTF subunit Presenilin-1 CTF subunit Presenilin-1 CTF12

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000015615, Cow)

Protein Percentage 96.58%
cDNA percentage 95.58%
Ka/Ks Ratio 0.15472 (Ka = 0.0176, Ks = 0.1138)

Additional orthologs identified in other species via the OPTIC pipeline.

PSEN1 (Human)   Psen1 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1410 bp    Location:874913..806385   Strand:-
Raw sequence 
>bmy_03574
ATGACAGAGTTACCTGCACCCTTGTCCTACTTCCAGAATGCACAGATGTCCGAGGACAACCACCTGAGCAATACTGTACGTAGCCAGAATGACAGTAGAGAGCGGCATGAGCACAGCAGCGAGAGACGGAGGCATGGCAACTCTGAGTCGTTATCCAATGGCCGAGCCCCCGGTAACTCRCAGCAGCAGGTGGTGGAACAAGAGGAAGAGGAAGATGAGGAGCTGACGTTGAAATATGGCGCCAAACATGTGATCATGCTCTTTGTCCCCGTGACTCTCTGTATGGTGGTGGTCGTGGCCACCATCAAATCAGTCAGCTTTTATACCCGGAAGGATGGGCAGCTAATCTATACGCCATTCACAGAAGACACCGAGACTGTGGGGCAGAGAGCCCTGCACTCAATTCTGAATGCTGCTATCATGATCAGCGTCATTGTCATCATGACTATTCTCCTGGTGGTTCTATATAAATACAGGTGCTATAAGGTCATCCATGCCTGGCTTATTATTTCATCCCTATTGTTGCTGTTCTTTTTCTCATTCATTTACTTGGGGGAAGTGTTTAAAACCTATAATGTTGCCATGGACTACATTACAGTTGCACTCCTGATCTGGAATTTTGGTGTGGTGGGAATGATTGCCATTCACTGGAAAGGTCCACTGAGACTCCAGCAGGCATATCTCATTATGATCAGTGCCCTCATGGCCCTGGTATTTATCAAGTACCTCCCAGAATGGACTGCGTGGCTCATCTTGGCTGTGATTTCAGTATATGATTTAGTGGCTGTTTTGTGTCCAAAAGGCCCACTTCGTATGCTGGTTGAAACAGCTCAGGAGAGAAATGAAACTCTCTTTCCGGCTCTTATTTACTCTTCAACAATGGTATGGTTGGTGAATATGGCAGAAGGAGACCCAGAAGCCCAAAGGAAGGTATCCAAAAACTCCAATTATAATGCACAAAGCACAGAAAGTGCGTCACAAGACCCTGTGACAGAGAGTGATGATGGTGGCTTCAGCGAAGAGTGGGAAGCCCAGAGGAACAGTCGCCTGGGGCCTCATCACTCTACGGCTGAGTCGCGATCTGCTGTACAGGATCTTTCCAGCAGCATCCTGGCCAGTGATGACCCAGAGGAAAGGGGAGTAAAACTTGGATTAGGAGATTTCATTTTCTACAGTGTTCTGGTTGGTAAAGCTTCCGCAACAGCCAGTGGAGACTGGAACACAACCATAGCCTGTTTTGTAGCCATATTAATTGGTTTGTGCCTTACATTATTGCTCCTTGCCATTTTCAAGAAAGCATTGCCAGCTCTTCCAATCTCTATCACCTTTGGGCTTGTTTTCTACTTTGCCACAGATTATCTTGTGCAACCCTTTATGGACCAGTTAGCRTTCCATCAGTTTTATATCTAG

Related Sequences

bmy_03574T0 Protein

Length: 470 aa      
>bmy_03574T0
MTELPAPLSYFQNAQMSEDNHLSNTVRSQNDSRERHEHSSERRRHGNSESLSNGRAPGNSQQQVVEQEEEEDEELTLKYGAKHVIMLFVPVTLCMVVVVATIKSVSFYTRKDGQLIYTPFTEDTETVGQRALHSILNAAIMISVIVIMTILLVVLYKYRCYKVIHAWLIISSLLLLFFFSFIYLGEVFKTYNVAMDYITVALLIWNFGVVGMIAIHWKGPLRLQQAYLIMISALMALVFIKYLPEWTAWLILAVISVYDLVAVLCPKGPLRMLVETAQERNETLFPALIYSSTMVWLVNMAEGDPEAQRKVSKNSNYNAQSTESASQDPVTESDDGGFSEEWEAQRNSRLGPHHSTAESRSAVQDLSSSILASDDPEERGVKLGLGDFIFYSVLVGKASATASGDWNTTIACFVAILIGLCLTLLLLAIFKKALPALPISITFGLVFYFATDYLVQPFMDQLAFHQFYI*