Part of scaffold_104 (Scaffold)

For more information consult the page for scaffold_104 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NR2C1 ENSTTRG00000016305 (Bottlenosed dolphin)

Gene Details

nuclear receptor subfamily 2, group C, member 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015454, Bottlenosed dolphin)

Protein Percentage 94.95%
cDNA percentage 96.52%
Ka/Ks Ratio 0.42535 (Ka = 0.0281, Ks = 0.0661)

BT.28215 ENSBTAG00000017729 (Cow)

Gene Details

nuclear receptor subfamily 2 group C member 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000023577, Cow)

Protein Percentage 93.56%
cDNA percentage 94.22%
Ka/Ks Ratio 0.22441 (Ka = 0.0353, Ks = 0.1575)

NR2C1  (Minke Whale)

Gene Details

nuclear receptor subfamily 2, group C, member 1

External Links

Gene match (Identifier: BACU020428, Minke Whale)

Protein Percentage 99.63%
cDNA percentage 99.69%
Ka/Ks Ratio 0.16239 (Ka = 0.0016, Ks = 0.0096)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1740 bp    Location:85625..127299   Strand:+
>bmy_03583
ATGAGGGAAGAGGAGCTTGGCACTGTATATTGGGGAATAAACAATATTCCAGTTGTCCTGAACAGAGGCCCCTCTGGGACTGAACAAGTAATTGAAGCATTTAAGGTTTTAAAAATTGTTACAGAGCAGCAAACTGGCCAGAAAATCCAGATTGTGACAGCACTTGATCATAATACCCAAGGCAAACAGTTCATTCTGACAAATCACAGTGGCTCTACTCCAAGCAAAGTCATTCTGTCCAGGCAAGATTCTACTCCAGGAAAAGTTTTCCTCACAACCCCAGATGCAACAGGTGTCAACCAGTTTATTTTTACAACTCCTGATTTGTCTGCACAACACCTCCAGCTCTTAACAGACAATTCTTCCTCCGAACAAGGACCAAATAAGGTTTTTGATCTTTGCGTAGTATGTGGAGACAAAGCATCAGGGCGTCATTATGGAGCGGTAACTTGTGAAGGCTGCAAAGGATTTTTTAAAAGAAGTATCCGAAAAAATTTAGTTTATTCATGTCGAGGATCAAAGGACTGTATTATTAATAAACACCATCGAAATCGTTGTCAATACTGCAGGTTACAAAGATGTATTGCGTTTGGAATGAAACAAGACTCTGTTCAGTGTGAAAGAAAACCCATTGAAGTATCAAGAGAAAAATCTTCCAACTGTGCCGCTTCAACAGAAAAAATCTACATTCGAAAAGACCTTCGAAGCCCATTAGCTGCAACTCCAACTTTTGTAACAGATAGTGAAACTGCAAGGTCAGCAGGACTGTTAGATTCAGGAATGTTTGTGAATATTCATCAATCTGGCATAAAAACTGAGTCAACTGTGCTGATGACACCAGATAAGGCTGAATCATGTCAGGGAGATTTAAGTACATTGGCAAGTGTGGTTACATCATTAGCAAACCTTGGAAAAACTAAAGATCTTTCTCAAAATAGTAATGAAATGTCTATGATTGAAAGCTTAAGCAATGGTGATACCTCTTTGTGTGAATTTCATCAAGAAATGCAGACTAATGGTGATGTTTCAAGGGCATTTGACACTCTTGCAAAAGCATTGAATCCTGGAGAGAGCACAGCCTGTCAGAGCTCAGTAGAGGGCATGGAAGGAAACGTACATCTAATTGCTGGAGACTCAAGCATAAATTACATCGAAAAAGAGGGGCCACTTCTCAGCGATTCACATGTAGCTTTCAGGCTCACCATGCCATCTCCTATGCCTGAGTACCTGAATGTGCACTACATTGGGGAGTCAGCCTCCAGACTGCTGTTCTTATCAATGCACTGGGCACTTTCGATTCCTTCCTTCCAGGCTCTAGGGCAAGAAAACAGTATATTATTGGTGAAAGCCTACTGGAATGAACTTTTTACTCTTGGTCTTGCCCAGTGCTGGCAAGTGATGAACGTAGCAGCTATATTAGCGACATTTGTCAATTGTCTTCACAGTAGCCTTCAACAAGATCATCCAGGCCTAGAAAACATGCAACAGATTGAGAAATTTCAGGAAAAGGCTTATGTGGAATTCCAAGATTACATAACCAAAACATATCCAGATGACACCTACAGGTTGTCCAGACTACTACTCAGATTGCCAGCTTTGAGGTTGATGAACGCTACCATCACCGAAGAATTGTTTTTCAAAGGTCTCATTGGCAATGTTCGAATTGACAGTGTCATCCCACATATTTTAAAAATGGAACCTGCAGATTATAACTCACAAATAATTGGTCACAGCATTTGA

Related Sequences

bmy_03583T0 Protein

Length: 580 aa      View alignments
>bmy_03583T0
MREEELGTVYWGINNIPVVLNRGPSGTEQVIEAFKVLKIVTEQQTGQKIQIVTALDHNTQGKQFILTNHSGSTPSKVILSRQDSTPGKVFLTTPDATGVNQFIFTTPDLSAQHLQLLTDNSSSEQGPNKVFDLCVVCGDKASGRHYGAVTCEGCKGFFKRSIRKNLVYSCRGSKDCIINKHHRNRCQYCRLQRCIAFGMKQDSVQCERKPIEVSREKSSNCAASTEKIYIRKDLRSPLAATPTFVTDSETARSAGLLDSGMFVNIHQSGIKTESTVLMTPDKAESCQGDLSTLASVVTSLANLGKTKDLSQNSNEMSMIESLSNGDTSLCEFHQEMQTNGDVSRAFDTLAKALNPGESTACQSSVEGMEGNVHLIAGDSSINYIEKEGPLLSDSHVAFRLTMPSPMPEYLNVHYIGESASRLLFLSMHWALSIPSFQALGQENSILLVKAYWNELFTLGLAQCWQVMNVAAILATFVNCLHSSLQQDHPGLENMQQIEKFQEKAYVEFQDYITKTYPDDTYRLSRLLLRLPALRLMNATITEELFFKGLIGNVRIDSVIPHILKMEPADYNSQIIGHSI*