Sequence detailsbmy_03583 (Coding sequence)

Part of scaffold_104 (SequenceType object (1))

For more information consult the page for scaffold_104 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NR2C1ENSTTRG00000016305 (Bottlenosed dolphin)

Gene Details

nuclear receptor subfamily 2, group C, member 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000015454, Bottlenosed dolphin)

Protein Percentage 94.95%
cDNA percentage 96.52%
Ka/Ks Ratio 0.42535 (Ka = 0.0281, Ks = 0.0661)

BT.28215ENSBTAG00000017729 (Cow)

Gene Details

nuclear receptor subfamily 2 group C member 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000023577, Cow)

Protein Percentage 93.56%
cDNA percentage 94.22%
Ka/Ks Ratio 0.22441 (Ka = 0.0353, Ks = 0.1575)

NR2C1 (Minke Whale)

Gene Details

nuclear receptor subfamily 2, group C, member 1

External Links

Gene match (Identifier: BACU020428, Minke Whale)

Protein Percentage 99.63%
cDNA percentage 99.69%
Ka/Ks Ratio 0.16239 (Ka = 0.0016, Ks = 0.0096)

Additional orthologs identified in other species via the OPTIC pipeline.

NR2C1 (Human)   Nr2c1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1740 bp    Location:85625..127299   Strand:+
Raw sequence 
>bmy_03583
ATGAGGGAAGAGGAGCTTGGCACTGTATATTGGGGAATAAACAATATTCCAGTTGTCCTGAACAGAGGCCCCTCTGGGACTGAACAAGTAATTGAAGCATTTAAGGTTTTAAAAATTGTTACAGAGCAGCAAACTGGCCAGAAAATCCAGATTGTGACAGCACTTGATCATAATACCCAAGGCAAACAGTTCATTCTGACAAATCACAGTGGCTCTACTCCAAGCAAAGTCATTCTGTCCAGGCAAGATTCTACTCCAGGAAAAGTTTTCCTCACAACCCCAGATGCAACAGGTGTCAACCAGTTTATTTTTACAACTCCTGATTTGTCTGCACAACACCTCCAGCTCTTAACAGACAATTCTTCCTCCGAACAAGGACCAAATAAGGTTTTTGATCTTTGCGTAGTATGTGGAGACAAAGCATCAGGGCGTCATTATGGAGCGGTAACTTGTGAAGGCTGCAAAGGATTTTTTAAAAGAAGTATCCGAAAAAATTTAGTTTATTCATGTCGAGGATCAAAGGACTGTATTATTAATAAACACCATCGAAATCGTTGTCAATACTGCAGGTTACAAAGATGTATTGCGTTTGGAATGAAACAAGACTCTGTTCAGTGTGAAAGAAAACCCATTGAAGTATCAAGAGAAAAATCTTCCAACTGTGCCGCTTCAACAGAAAAAATCTACATTCGAAAAGACCTTCGAAGCCCATTAGCTGCAACTCCAACTTTTGTAACAGATAGTGAAACTGCAAGGTCAGCAGGACTGTTAGATTCAGGAATGTTTGTGAATATTCATCAATCTGGCATAAAAACTGAGTCAACTGTGCTGATGACACCAGATAAGGCTGAATCATGTCAGGGAGATTTAAGTACATTGGCAAGTGTGGTTACATCATTAGCAAACCTTGGAAAAACTAAAGATCTTTCTCAAAATAGTAATGAAATGTCTATGATTGAAAGCTTAAGCAATGGTGATACCTCTTTGTGTGAATTTCATCAAGAAATGCAGACTAATGGTGATGTTTCAAGGGCATTTGACACTCTTGCAAAAGCATTGAATCCTGGAGAGAGCACAGCCTGTCAGAGCTCAGTAGAGGGCATGGAAGGAAACGTACATCTAATTGCTGGAGACTCAAGCATAAATTACATCGAAAAAGAGGGGCCACTTCTCAGCGATTCACATGTAGCTTTCAGGCTCACCATGCCATCTCCTATGCCTGAGTACCTGAATGTGCACTACATTGGGGAGTCAGCCTCCAGACTGCTGTTCTTATCAATGCACTGGGCACTTTCGATTCCTTCCTTCCAGGCTCTAGGGCAAGAAAACAGTATATTATTGGTGAAAGCCTACTGGAATGAACTTTTTACTCTTGGTCTTGCCCAGTGCTGGCAAGTGATGAACGTAGCAGCTATATTAGCGACATTTGTCAATTGTCTTCACAGTAGCCTTCAACAAGATCATCCAGGCCTAGAAAACATGCAACAGATTGAGAAATTTCAGGAAAAGGCTTATGTGGAATTCCAAGATTACATAACCAAAACATATCCAGATGACACCTACAGGTTGTCCAGACTACTACTCAGATTGCCAGCTTTGAGGTTGATGAACGCTACCATCACCGAAGAATTGTTTTTCAAAGGTCTCATTGGCAATGTTCGAATTGACAGTGTCATCCCACATATTTTAAAAATGGAACCTGCAGATTATAACTCACAAATAATTGGTCACAGCATTTGA

Related Sequences

bmy_03583T0 SequenceType object (3)

Length: 580 aa      View alignments
>bmy_03583T0
MREEELGTVYWGINNIPVVLNRGPSGTEQVIEAFKVLKIVTEQQTGQKIQIVTALDHNTQGKQFILTNHSGSTPSKVILSRQDSTPGKVFLTTPDATGVNQFIFTTPDLSAQHLQLLTDNSSSEQGPNKVFDLCVVCGDKASGRHYGAVTCEGCKGFFKRSIRKNLVYSCRGSKDCIINKHHRNRCQYCRLQRCIAFGMKQDSVQCERKPIEVSREKSSNCAASTEKIYIRKDLRSPLAATPTFVTDSETARSAGLLDSGMFVNIHQSGIKTESTVLMTPDKAESCQGDLSTLASVVTSLANLGKTKDLSQNSNEMSMIESLSNGDTSLCEFHQEMQTNGDVSRAFDTLAKALNPGESTACQSSVEGMEGNVHLIAGDSSINYIEKEGPLLSDSHVAFRLTMPSPMPEYLNVHYIGESASRLLFLSMHWALSIPSFQALGQENSILLVKAYWNELFTLGLAQCWQVMNVAAILATFVNCLHSSLQQDHPGLENMQQIEKFQEKAYVEFQDYITKTYPDDTYRLSRLLLRLPALRLMNATITEELFFKGLIGNVRIDSVIPHILKMEPADYNSQIIGHSI*