Part of scaffold_104 (Scaffold)

For more information consult the page for scaffold_104 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TMCC3 ENSTTRG00000009354 (Bottlenosed dolphin)

Gene Details

transmembrane and coiled-coil domain family 3

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008865, Bottlenosed dolphin)

Protein Percentage 97.78%
cDNA percentage 97.56%
Ka/Ks Ratio 0.10396 (Ka = 0.0095, Ks = 0.0915)

BT.43570 ENSBTAG00000014375 (Cow)

Gene Details

transmembrane and coiled-coil domains protein 3

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000019113, Cow)

Protein Percentage 90.97%
cDNA percentage 88.66%
Ka/Ks Ratio 0.07511 (Ka = 0.0506, Ks = 0.6733)

TMCC3  (Minke Whale)

Gene Details

transmembrane and coiled-coil domain family 3

External Links

Gene match (Identifier: BACU000963, Minke Whale)

Protein Percentage 95.96%
cDNA percentage 96.45%
Ka/Ks Ratio 0.28369 (Ka = 0.0267, Ks = 0.094)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1431 bp    Location:508397..519182   Strand:+
>bmy_03587
ATGTCTGTGGTGTGTGCACAGACTCCATCACAGCGACTGTCTCTTCGACTTCCAGTCTTAAAGTGCTTCTTCCCTGTAGAACGTCATGACATGAATACACTAAGCCTTCCCCTGAACATCCGCCGAGGCGGGTCGGACACCAACCTCAACTTTGATGTACCAGATGGCATCCTGGACTTCCACAAGGTCAAACTCAGTGCGGACAGCCTGAAGCAGAAAATTCTAAAGGTCACAGAGCAGATAAGAATCGAGCAAACGTCCCGCGATGGGAATGTCGCAGAGTATCTGAAACTAGTCAGCAGCGCGGACAAGCAGCAGGCTGGCCGCATCAAGCAGGTCTTTGAGAAGAAGAATCAAAAGTCGGCTCAATCCATTGCCCAGCTGCAGAAGAAGTTAGAGCAGTATCACAGAAAGCTCCGGGAGCTCGAGCAGAATGGGGCCCCCAGGAGCTCAAAGGACATTGCCAAGGACAACCTGAAGGACATCCAGCCCTCTCTGAAGGATGCCCAGGCCAAGGCTCGCACCGCTCCCCACAGCCTGGAGAGCAGTAAGTCGGGCCTGCCGGGGGTGTCCCTCACCCCACCCGTGTTCGTCTTCAGCAAGTCCAGAGAGTTCGCCAACTTGATCCGGAATAAGTTTGGCAGTGCCGACAACATCGCTCACCTAAGAAACTCCTTGGAGGAGTTCCGGCCCGAGGCCAGCGCCAGGGCCTACGGGGGCAGCGCCACCATCGTGAACAAGCCCAAGTACGGCAGCGACGACGAGTGCTCGAGCGGCACGTCAGGCTCCGCCGACAGCAACGGGAACCAGTCGTTCGGGGCCGGGGGCACTGGCACGCTGGACAGCCAGGGCAAGCTCACGGCCATCCTGGAGGAGCTCAGGGAGATCAAGGACACCCAGGCGCAGCTGGCCGAGGACATCGAGGCACTGAAGGTGCAGTTCAAGAGGGAGTATGGCTTCATCTCTCAGACCCTGCAAGAGGAGACATACAGGTACGAGCGACTGGAAGACCAGCTGCACGACCTCACGGACCTGCATCAGCATGAGACAGCCAACCTGAAGCAGGAGCTGGCCAGCATCGAGGAGAAGGTGGCCTACCAGGCCTACGAGCGATCACGGGACATCCAGGAAGCCTTGGAGTCCTGCCAGACTCGCATTTCTAAGTTGGAGCTGCACCAGCAGGAGCAGCAAGCCCTGCAGTCCGACACCGTGAACGCCAAGGTCCTCCTGGGGAAATGCATCAACGTGGTCCTGGCCTTCATGACTGTCATCTTGGTGTGTGTGTCCACCATCGCCAAGTTCATCTCGCCCATGATGAAGAGCCGCTTCCACATTCTCGGCACCTTCTTCGCTGTGACTCTCCTGGCAATATTCTGTAAAAACTGGGACCATATCCTGTGTGCCATAGAAAGGATAATAATACCAAGATGA

Related Sequences

bmy_03587T0 Protein

Length: 477 aa      View alignments
>bmy_03587T0
MSVVCAQTPSQRLSLRLPVLKCFFPVERHDMNTLSLPLNIRRGGSDTNLNFDVPDGILDFHKVKLSADSLKQKILKVTEQIRIEQTSRDGNVAEYLKLVSSADKQQAGRIKQVFEKKNQKSAQSIAQLQKKLEQYHRKLRELEQNGAPRSSKDIAKDNLKDIQPSLKDAQAKARTAPHSLESSKSGLPGVSLTPPVFVFSKSREFANLIRNKFGSADNIAHLRNSLEEFRPEASARAYGGSATIVNKPKYGSDDECSSGTSGSADSNGNQSFGAGGTGTLDSQGKLTAILEELREIKDTQAQLAEDIEALKVQFKREYGFISQTLQEETYRYERLEDQLHDLTDLHQHETANLKQELASIEEKVAYQAYERSRDIQEALESCQTRISKLELHQQEQQALQSDTVNAKVLLGKCINVVLAFMTVILVCVSTIAKFISPMMKSRFHILGTFFAVTLLAIFCKNWDHILCAIERIIIPR*