Part of scaffold_104 (Scaffold)

For more information consult the page for scaffold_104 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SOCS2 ENSTTRG00000003313 (Bottlenosed dolphin)

Gene Details

suppressor of cytokine signaling 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003109, Bottlenosed dolphin)

Protein Percentage 98.48%
cDNA percentage 99.16%
Ka/Ks Ratio 0.48158 (Ka = 0.0068, Ks = 0.0141)

SOCS2 ENSBTAG00000012007 (Cow)

Gene Details

Suppressor of cytokine signaling 2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000015929, Cow)

Protein Percentage 95.45%
cDNA percentage 96.63%
Ka/Ks Ratio 0.34983 (Ka = 0.0224, Ks = 0.064)

SOCS2  (Minke Whale)

Gene Details

suppressor of cytokine signaling 2

External Links

Gene match (Identifier: BACU000973, Minke Whale)

Protein Percentage 98.99%
cDNA percentage 99.66%
Ka/Ks Ratio 99.0 (Ka = 0.0043, Ks = 0.0)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 639 bp    Location:1379560..1374294   Strand:-
>bmy_03594
ATGACCCTGCGGTGCCTCGAGCCCTCCGGGAATGGCGCGGAAGGGACGCCGAGCCATTGGGGGACCTCGGGGTCGGCGGAGGAGCCGTCCCCGGAGGCGGCGCGTCTGGCGAAGGCCCTGCGGGAACTTAGTGACACAGGCCACGGGCTTTCCCTCAGCGGGAGGAACCGGCAGATCGCAGGTTGGTACTGGGGAAGTATGACTGTTAATGAAGCCAAAGAGAAATTAAAAGAGGCACCAGAAGGAACTTTCTTGATTAGAGATAGTTCGCATTCAGACTACCTACTAACAATATCTGTTAAAACATCAGCTGGACCAACTAATCTTCGCATCGAATACCAAGATGGGAAATTTAGATTGGACTCTATCATATGTGTCAAGTCCAAGCTTAAACAATTTGACAGTGTGGTTCATCTGATCGACTACTATGTTCAGATGTGCAAGGATAAGCGGACGGGCCCAGAAGGCCCCCGGAACGGCACTGTTCACCTTTATCTGACCAAACCGCTCTACACATCAGCACCACCTCTGCAGCATCTCTGTAGACTCACCATTAACAAATGTACCGGTACCATCTGGGGACTGCCTTTACCAACAAGACTAAAAGATTACTTGGAAGAATATAAATTCCAGGTATAA

Related Sequences

bmy_03594T0 Protein

Length: 213 aa      View alignments
>bmy_03594T0
MTLRCLEPSGNGAEGTPSHWGTSGSAEEPSPEAARLAKALRELSDTGHGLSLSGRNRQIAGWYWGSMTVNEAKEKLKEAPEGTFLIRDSSHSDYLLTISVKTSAGPTNLRIEYQDGKFRLDSIICVKSKLKQFDSVVHLIDYYVQMCKDKRTGPEGPRNGTVHLYLTKPLYTSAPPLQHLCRLTINKCTGTIWGLPLPTRLKDYLEEYKFQV*