Part of scaffold_105 (Scaffold)

For more information consult the page for scaffold_105 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

MYOD1 ENSBTAG00000002216 (Cow)

Gene Details

myoblast determination protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000002868, Cow)

Protein Percentage 97.17%
cDNA percentage 95.7%
Ka/Ks Ratio 0.0547 (Ka = 0.0118, Ks = 0.216)

MYOD1  (Minke Whale)

Gene Details

myogenic differentiation 1

External Links

Gene match (Identifier: BACU005619, Minke Whale)

Protein Percentage 98.75%
cDNA percentage 98.61%
Ka/Ks Ratio 0.09173 (Ka = 0.0053, Ks = 0.0577)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 960 bp    Location:899393..901102   Strand:+
>bmy_03612
ATGGAGCTGCTTTCGCCGCCGATCCGAGACGTAGATTTGACGGGCCCCGACGGCTCTCTCTGCAACTTTGCAACAGCGGACGACTTCTATGATGACCCGTGTTTCGACTCCCCGGACCTGCGCTTCTTCGAGGACCTGGATCCGCGCCTCGTGCACGTGGGCGCGCTCCTGAAGCCCGAGGAACACTCGCACTTCCCTGCGGCCGCGCACCCGGTGCCGGGCGCGCGCGAGGATGAGCATGTGCGCGCGCCCAGCGGGCACCACCAGGCGGGCCGCTGTCTACTGTGGGCCTGCAAGGCGTGCAAACGCAAGACCACTAACGCGGACCGCCGCAAGGCTGCTACCATGCGCGAGCGGCGCCGCCTGAGCAAAGTCAACGAGGCCTTCGAGACGCTCAAGCGCTGCACGTCTAGCAACCCAAACCAGCGGCTGCCCAAGGTGGAGATCCTGCGCAACGCCATCCGCTATATCGAAGGTCTGCAGGCGCTGCTTCGCGACCAGGACGCCGCGCCCCCCGGTGCTGCCGCTGCCTTTTACGCGCCTGGCCCGTTGCCCCCAGGCCGCGGCGGCGAGCACTACAGCGGAGACTCGGACGCGTCCAGTCCGCGCTCCAATTGCTCCGACGGCATGATGGACTACAGCGGCCCCCCGAGCGGTGCCCGGCGGCGGAACTGCTACGACGGCACCTACTACAGCGAGGCGCCCAACGAACCCCGGCCCGGGAAGAGTGCTGCGGTGTCGAGCCTCGACTGCCTGTCCAGCATCGTGGAGCGCATCTCCACCGAGAGCCCCGCCGCGCCCGCTCTTCTGCTGGCCGACGCGCCGCCGGCGTCGTCTCCAGGCCCGCAAGAGGCGGCCGCCGGGAGCGAGGTCGAGCGCGGCAGCCCCACCCCTTCCCCCGACACCGCCCCTCAGTGCCCAGCGGGCGCGAACCCCAACCCGATCTACCAGGTGCTCTGA

Related Sequences

bmy_03612T0 Protein

Length: 320 aa      View alignments
>bmy_03612T0
MELLSPPIRDVDLTGPDGSLCNFATADDFYDDPCFDSPDLRFFEDLDPRLVHVGALLKPEEHSHFPAAAHPVPGAREDEHVRAPSGHHQAGRCLLWACKACKRKTTNADRRKAATMRERRRLSKVNEAFETLKRCTSSNPNQRLPKVEILRNAIRYIEGLQALLRDQDAAPPGAAAAFYAPGPLPPGRGGEHYSGDSDASSPRSNCSDGMMDYSGPPSGARRRNCYDGTYYSEAPNEPRPGKSAAVSSLDCLSSIVERISTESPAAPALLLADAPPASSPGPQEAAAGSEVERGSPTPSPDTAPQCPAGANPNPIYQVL*