Sequence detailsbmy_03613 (Coding sequence)

Part of scaffold_105 (SequenceType object (1))

For more information consult the page for scaffold_105 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

KCNC1ENSTTRG00000013876 (Bottlenosed dolphin)

Gene Details

potassium voltage-gated channel, Shaw-related subfamily, member 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000013153, Bottlenosed dolphin)

Protein Percentage 85.19%
cDNA percentage 86.04%
Ka/Ks Ratio 0.28636 (Ka = 0.0529, Ks = 0.1847)

KCNC1ENSBTAG00000005424 (Cow)

Gene Details

potassium voltage-gated channel subfamily C member 1 isoform A

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000007132, Cow)

Protein Percentage 94.33%
cDNA percentage 92.28%
Ka/Ks Ratio 0.12432 (Ka = 0.0373, Ks = 0.3001)

Additional orthologs identified in other species via the OPTIC pipeline.

KCNC1 (Human)   Kcnc1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1221 bp    Location:946639..956139   Strand:+
Raw sequence 
>bmy_03613
ATGACCAGCTGGGCCCCCGGAGGAGAACCCCTGGCCAGGGGAACCCTGGCCAGGGAAGTGTTAGTGTTCCAGGGACCTCGACTGGAGGCTTATGTGGCCTTTGCCTCCCTCTTCTTCATCCTGGTCTCCATCACCACCTTCTGCCTGGAGACCCACGAGCGCTTCAACCCCATCGTGAACAAGACAGAGATCGAGAATGTTCGGAATGGCACGCAAGTGCGCTACTACCGGGAAGCGGAGACAGAGGCCTTCCTCACCTACATCGAGGGCGTCTGCGTGGTCTGGTTCACCTTCGAGTTCCTCATGCGTGTGGTCTTCTGCCCCAACAAGGTGGAGTTCATCAAGAACTCGCTCAACATCATTGACTTTGTGGCCATCCTGCCCTTCTACCTGGAGGTGGGCCTGAGCGGCCTGTCCTCTAAGGCGGCCAAGGACGTGCTGGGCTTCCTGCGTGTCGTCCGCTTCGTGCGTATCCTGCGCATCTTCAAGCTGACCCGCCACTTCGTGGGCCTGCGCGTCCTGGGCCACACTCTCCGCGCCAGTACCAATGAGTTCTTACTGCTCATCATCTTCCTGGCTCTGGGCGTCCTGATTTTCGCCACCATGATCTACTATGCCGAGAGGATAGGGGCGCAGCCCAATGACCCCAGTGCCAGTGAGCACACCCACTTTAAGAACATCCCCATTGGCTTCTGGTGGGCCGTGGTCACCATGACGACGCTGGGCTACGGAGACATGTACCCGCAGACGTGGTCCGGCATGTTGGTGGGAGCGCTGTGTGCGCTGGCGGGTGTGCTGACCATCGCCATGCCCGTGCCCGTCATTGTGAACAATTTCGGGATGTATTACTCCTTAGCCATGGCTAAGCAGAAACTACCAAAGAAAAAAAAGAAGCATATTCCGCGGCCACCGCAGCTGGGATCTCCCAATTATTGTAAATCTGTCGTAAACTCTCCACACCACAGTACTCAGAGTGACACATGCCCGCTGGCCCAGGAAGAAATTTTAGAAATTAACAGAGCAGATTCCAAACTGAATGGGGAGGTGGCGAAGGCCGCGCTGGCGAACGAAGACTGCCCCCACATAGACCAGGCCCTCACTCCCGATGAGGGCCTGCCCTTTACGCGCTCGGGCACCCGCGAGAGATACGGACCCTGCTTCCTCTTATCAACCGGGGAGTACGCGTGCCCACCTGGTGGAGGAGTGAGAAAGGGTATGTAG

Related Sequences

bmy_03613T0 SequenceType object (3)

Length: 407 aa      View alignments
>bmy_03613T0
MTSWAPGGEPLARGTLAREVLVFQGPRLEAYVAFASLFFILVSITTFCLETHERFNPIVNKTEIENVRNGTQVRYYREAETEAFLTYIEGVCVVWFTFEFLMRVVFCPNKVEFIKNSLNIIDFVAILPFYLEVGLSGLSSKAAKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERIGAQPNDPSASEHTHFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALCALAGVLTIAMPVPVIVNNFGMYYSLAMAKQKLPKKKKKHIPRPPQLGSPNYCKSVVNSPHHSTQSDTCPLAQEEILEINRADSKLNGEVAKAALANEDCPHIDQALTPDEGLPFTRSGTRERYGPCFLLSTGEYACPPGGGVRKGM*