Sequence details bmy_03652 (Coding sequence)

Part of scaffold_103 (Scaffold)

For more information consult the page for scaffold_103 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NUP98 ENSTTRG00000016640 (Bottlenosed dolphin)

Gene Details

nucleoporin 98kDa

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015779, Bottlenosed dolphin)

Protein Percentage 82.76%
cDNA percentage 83.05%
Ka/Ks Ratio 0.27759 (Ka = 0.016, Ks = 0.0576)

NUP98 ENSBTAG00000008432 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000011092, Cow)

Protein Percentage 95.11%
cDNA percentage 94.31%
Ka/Ks Ratio 0.16814 (Ka = 0.0259, Ks = 0.1542)

NUP98  (Minke Whale)

Gene Details

nucleoporin 98kDa

External Links

Gene match (Identifier: BACU004955, Minke Whale)

Protein Percentage 97.86%
cDNA percentage 98.28%
Ka/Ks Ratio 0.35875 (Ka = 0.012, Ks = 0.0335)

Genome Location

Sequence Coding sequence

Length: 3501 bp    Location:488973..524933   Strand:+
Raw sequence 
>bmy_03652
AAGAGCATTAAGAAGCTGGTTTTGAAAAACCTTAACAATAGCAATCTCTTCTCTCCTGTTAATCGTGATTCAGAAGATCTAGCTTCACCATCTGATTATCCAGAAAATGGAGAGAGATTCAGTTTTCTGAGCAAACCAGTCGATGAAAACCATCAGCAGGATGGAGATGAAGATTCTCTTGTGTCACGTCTTTATACCAACCCAATTGCCAAACCCATTCCTCAAACCCCAGAGAGTGCTGGAAATAAACATAACAGCAGCAACAGTGTGGATGATACCATTGTTGCGTTAAACATGCGTGCTGCCTTGCGAAATGGGCTGGAAGGAAGCAGTGAAGAAACCTCTTTTCATGAGGAGTCACTGCAGGATGACCGAGAAGAAATAGAAAATAATGCTTACCATATGCATCCAGCAGGCATCATTCTCACTAAGGTTGGCTACTATACTATTCCATCCATGGATGACCTAGCTAAAATTACCAATGAAAAAGGAGAGTGCATTGTCTCTGACTTCACTATTGGTCGTAAAGGTTATGGTTCAATCTATTTTGAAGGAGATGTGAATTTGACAAATCTAAATTTAGATGACATTGTGCATATCCGAAGGAAAGAAGTGATTGTCTACTTAGATGATAACCAAAAACCACCTGTGGGTGAAGGGCTAAATAGGAAGGCTGAAGTTACATTGGATGGAGTTTGGCCAACAGATAAAACATCTCGTTGTTTAATAAAGAGCCCAGATCGACTTGCTGATATCAACTATGAGGGAAGATTGGAAGCAGTTTCAAGGAAACAGGGAGCTCAGTTCAAAGAGTACCGTCCTGAAACTGGTTCTTGGGTATTTAAGGTCTCTCATTTTTCTAAGTATGGCCTTCAGGATTCTGATGAAGAGGAGGAGGAACGGCCATCCAAAACTAGTACAAAGAAGTTGAAGACTACCCCTTTACCTCCTGCAGGCCAGGCCACCCCATTCCAGATGGCTCTTAATGGCAAACCAGCACCTCCACCCCAGAGCCAGAGCCCAGAGGTGGAGCAGTTAGGGAGGGTTGTGGAACTGGACAGTGACATGGTAGATATCACCCAGGAGCCAGTTTTGGATTCCATGTTAGAAGAGAGCGTGCCTGAGGATCAGGAACCTGTGTCTGCCTCAACACACATTGCGTCTTCACTGGGAATTAATCCACATGTCTTACAGATCATGAAAGCATCACTGCTTGCTGATGAAGAAGATGTAGATATGGTCCTGGATCAACGCTTCAGTCGCCTTCCTTCTAAAGCAGATACTTCTCAAGAAATCTGTTCTCCCAGGCTCCCCATTTCAGCAACTCACTCATCAAAATCCCGTTCATTAGTAGGTGGGTTACTACAATCAAAATTTGCAAGTGGAACTTTTCTTTCACCAGGTGCCTCTTTACAAGAGTGTCGCACTCCCAGAACATCGTCATTGATGAATATTGCATCCACATCCCCTTGGTCTGTCCCTCCACCCCTGACCTCTGTGTTTACGGTGCCCAGCCCAGCCCCTGAGGTTCAGTTGAAAACAGTGGGTACACGCAGACAACCAGGCCTAGTCCCTCTTGAAAAGTCTGTCACCTATGGAAAGGGGAAACTCCTGATGGACCTGGCCCTATTTATGGGACGCTCATTTCGGGTTGGTTGGGGCCCCAACTGGACTCTTGCTAATAGTGGAGAACAGCTGAGTGGTCCTCAGGAACTGGAAAATCATCAGATTGCTGATTCTGTGGAATATGGATTCCTGCCTAATCCAGTAGCTGTTAAATCACTTAATAAGTTATTGTATGGCTTCATGTCATTGCATTATTTTCCTGTCCCTTCCTTAGTTGTGAAGCACTGGAGCCTAACATGGACCTTATGTGAAGCTCTATGGGGCCACCTGAAGGAGCTTGACAGCCAGCTGGATGAGCCCACTGAATACATTCAGATTCTGGAGCGAAGAAGAGCTTTCTCTCGCTGGCTGTCCCATACTGCTGCACCTCAAATTGAGGAGGAAGTCTCCTTAACCCGAAAAGACAGCCCTGTGGAGGCTGTCTTCAGCTACCTCACGGGCAAGAGGATCAGTGAGGCCTGCTCCCTGGCCCAGCAGTCAGGTGATCATCGTCTTGCCCTTCTTTTATCCCAGTTGGTTGGCAGCCAGTCGGTCCGGGAGCTGCTTACTATGCAGCTGGTAGATTGGCATCAGCTCCAGGCTGACTGTTTCATCCAGGAGGAGAGACTGCGCATCTTTGCCCTCTTGGCTGGAAAACCGGTATGGCAGCTCTCAGAGCAGAAGCAAATCAATGTGTGCTCACAGTTGGATTGGAAACGGTCCCTGGCTGTCCATCTTTGGTATTTGCTCCCACCAACAGCCTCCATTTCCAAGGCACTCAGCATGTATGAAGAAGCATTTCAGAATACCTCTGAGGGTGACAGATATGCCTGCTGCCCACTTCCCTCATACCTGGAGGACTCTGGCTTTGTGGTAGAGGAGGAGCAAGACTCACAGAGACCTCTTCAAGATGTCTGCTTTCACCTTCTAAAACTCTATAGTGACAGACATTATGATCTCAACCAACTGCTGGAGCCTCGAAGCGTCACAGCAGATCCTTTGGACTACCGCCTAAGCTGGCACTTGTGGGAGGTGCTGCGGGCTCTTAACTACACCCATCTCTCAGAGCAGTGTGAGGGTGTGCTGCAGGCCAGTTATGCTGGCCAGCTGGAAAGTGAGGGGCTCTGGGAGTGGGCCATCTTTGTCCTCCTGCACATTGACAACTCAAGCATGCGTGAGAAGGCTGTTCGAGAGCTGCTTACGCGGCACTGCCAACTGTTGGAGACCCCTGAATCTTGGGCTAAGGAGATTTTCCTGACCGAGAAGCTTTGTGTGCCTGCTGAGTGGATTCATGAGGCCAAAGCAGTGCGAGCACACATGGAATCCGACAGGCACTTGGAGGCCCTCTATTTATTTAAAGCGGGGCACTGGAACCGCTGCCACAAACTCGTCATCCGACACTTAGCTTCTGATGCCATTATTAACGAGAACTATGACTACCTGAAGGGGTTCTTGGAAGACCTGGCACCCCCAGAGCGTAGCAGCCTAATCCAGGACTGGGAAACATCTGGGCTTGTTTACCTGGACTACATTCGGGTCATCGAAATGCTCCATCATATACAGCAGGTGGATTGCTCAGGTTATGAGCTAGAGCAGTTACATACCAAAGTGACCTCACTGTGCAACCGGATAGAGCAGATCCAGTGTTACAATGCCAAGGATCGCCTGGCTCAGTCAGACATGGCCAAACGTGTAGCCAACCTGCTGCGGGTGGTACTGAGCCTTCAGCACGCCCCTGATGCAACCTCCGACTCAACGCCAGACCCTCAGCGAGTCCCTTTGCGCCTGTTGGCCCCCCACATTGGCCGGCTCCCCATGCCTGAGGACTATGCCTTGGAGGAACTGCGCAGTCTCACACAGTCCTACCTGCGGGAACTGACTGTTGGGAGCCAGTGA

Related Sequences

bmy_03652T0 Protein

Length: 1167 aa      View alignments
>bmy_03652T0
KSIKKLVLKNLNNSNLFSPVNRDSEDLASPSDYPENGERFSFLSKPVDENHQQDGDEDSLVSRLYTNPIAKPIPQTPESAGNKHNSSNSVDDTIVALNMRAALRNGLEGSSEETSFHEESLQDDREEIENNAYHMHPAGIILTKVGYYTIPSMDDLAKITNEKGECIVSDFTIGRKGYGSIYFEGDVNLTNLNLDDIVHIRRKEVIVYLDDNQKPPVGEGLNRKAEVTLDGVWPTDKTSRCLIKSPDRLADINYEGRLEAVSRKQGAQFKEYRPETGSWVFKVSHFSKYGLQDSDEEEEERPSKTSTKKLKTTPLPPAGQATPFQMALNGKPAPPPQSQSPEVEQLGRVVELDSDMVDITQEPVLDSMLEESVPEDQEPVSASTHIASSLGINPHVLQIMKASLLADEEDVDMVLDQRFSRLPSKADTSQEICSPRLPISATHSSKSRSLVGGLLQSKFASGTFLSPGASLQECRTPRTSSLMNIASTSPWSVPPPLTSVFTVPSPAPEVQLKTVGTRRQPGLVPLEKSVTYGKGKLLMDLALFMGRSFRVGWGPNWTLANSGEQLSGPQELENHQIADSVEYGFLPNPVAVKSLNKLLYGFMSLHYFPVPSLVVKHWSLTWTLCEALWGHLKELDSQLDEPTEYIQILERRRAFSRWLSHTAAPQIEEEVSLTRKDSPVEAVFSYLTGKRISEACSLAQQSGDHRLALLLSQLVGSQSVRELLTMQLVDWHQLQADCFIQEERLRIFALLAGKPVWQLSEQKQINVCSQLDWKRSLAVHLWYLLPPTASISKALSMYEEAFQNTSEGDRYACCPLPSYLEDSGFVVEEEQDSQRPLQDVCFHLLKLYSDRHYDLNQLLEPRSVTADPLDYRLSWHLWEVLRALNYTHLSEQCEGVLQASYAGQLESEGLWEWAIFVLLHIDNSSMREKAVRELLTRHCQLLETPESWAKEIFLTEKLCVPAEWIHEAKAVRAHMESDRHLEALYLFKAGHWNRCHKLVIRHLASDAIINENYDYLKGFLEDLAPPERSSLIQDWETSGLVYLDYIRVIEMLHHIQQVDCSGYELEQLHTKVTSLCNRIEQIQCYNAKDRLAQSDMAKRVANLLRVVLSLQHAPDATSDSTPDPQRVPLRLLAPHIGRLPMPEDYALEELRSLTQSYLRELTVGSQ*