Sequence detailsbmy_03686 (Coding sequence)

Part of scaffold_109 (SequenceType object (1))

For more information consult the page for scaffold_109 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PRRX1ENSTTRG00000006467 (Bottlenosed dolphin)

Gene Details

paired related homeobox 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000006120, Bottlenosed dolphin)

Protein Percentage 99.39%
cDNA percentage 99.19%
Ka/Ks Ratio 0.12053 (Ka = 0.0028, Ks = 0.0234)

PRRX1ENSBTAG00000004570 (Cow)

Gene Details

paired mesoderm homeobox protein 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000006003, Cow)

Protein Percentage 97.01%
cDNA percentage 96.81%
Ka/Ks Ratio 0.21865 (Ka = 0.017, Ks = 0.0779)

Additional orthologs identified in other species via the OPTIC pipeline.

PRRX1 (Human)   Prrx1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 504 bp    Location:24838..9772   Strand:-
Raw sequence 
>bmy_03686
ATGAATGATGATCAACTGAACTCAGAGGAAAAGAAAAAGAGAAAGCAGCGGAGGAACAGGACAACCTTCAACAGCAGCCAGCTGCAGGCTTTGGAGCGTGTCTTTGAGCGGACACACTACCCGGATGCTTTTGTGCGAGAAGACCTCGCCCGCCGGGTGAACCTCACCGAGGCCAGAGTGCAGGTGTGGTTTCAGAACCGAAGAGCCAAATTCCGCAGGAATGAGAGAGCCATGCTGGCCAATAAAAACGCTTCCCTCCTCAAAACCTACTCAGGAGATGTGACTGCTGTGGAGCAGCCCATCGTACCTCGTCCTGCTCCGAGACCCACTGATTATCTCTCCTGGGGGACGGCCTCTCCGTACAGCGCCATGGCTACTTATTCTGCCACATGTGCCAACAATAGCCCTGCACAGGGCATCAACATGGCCAACAGCATTGCCAACCTGAGACTGAAGGCCAAGGAATATAGTTTACAGAGGAACCAGGTGCCAACAGTCAACTGA

Related Sequences

bmy_03686T0 SequenceType object (3)

Length: 168 aa      View alignments
>bmy_03686T0
MNDDQLNSEEKKKRKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLANKNASLLKTYSGDVTAVEQPIVPRPAPRPTDYLSWGTASPYSAMATYSATCANNSPAQGINMANSIANLRLKAKEYSLQRNQVPTVN*