Part of scaffold_109 (Scaffold)

For more information consult the page for scaffold_109 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

GORAB ENSTTRG00000008948 (Bottlenosed dolphin)

Gene Details

golgin, RAB6-interacting

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008486, Bottlenosed dolphin)

Protein Percentage 93.39%
cDNA percentage 95.5%
Ka/Ks Ratio 0.84631 (Ka = 0.0448, Ks = 0.0529)

BT.18123 ENSBTAG00000003295 (Cow)

Gene Details

RAB6-interacting golgin

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000050555, Cow)

Protein Percentage 86.49%
cDNA percentage 90.04%
Ka/Ks Ratio 0.43259 (Ka = 0.0824, Ks = 0.1905)

GORAB  (Minke Whale)

Gene Details

golgin, RAB6-interacting

External Links

Gene match (Identifier: BACU019516, Minke Whale)

Protein Percentage 99.14%
cDNA percentage 99.42%
Ka/Ks Ratio 0.40489 (Ka = 0.0041, Ks = 0.01)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1077 bp    Location:177331..155345   Strand:-
>bmy_03687
TCAGCCGCGGCAAGGGAAGAACCCGGATGTGCCTGGGTAGCTGTGTTGGCAATTGGGGCTCTGAGGTTTGGGCGTTCTAGGCGTGCTGGCAAGTCGAGGCGGATGGCGCAGGGTTGGGCCGGCTTCTCTGAGGAGGAGCTGAGGCGACTAAAGCAGACTAAAGATCCATTTGAACCACAGCGGCGTCTTGTCCCTGTGAAGAAAAGTCGACAACAACTTCAGCGAGAAAAAGCCCTTCAAGAGCAAAGCCAAAAACTTGGACTTCAAGATGGATCAACCTCATTACCTCCAGAGCAGCTGCTTTCTGCACCAAAACAAAGATTTAATACTCAAAGACCATGTTCTTCTCCCCCCACTCCCCCTACACTCACCTCTCCTATTGGTGATGGAAAACCACAGGGTATTGAAAGTCAACCAAGGGAACTAGGACTTAAGAATTCCCATGAAGGTCACAAAAATGCTGAGGTTCTACCTCCAAAACCAGATTGCAAATTGGAAAAAAAGAAAGTGGAATTGCAAGGAAAATCTCGTTGGGAAGTCCTCCAACAAGAACAACGGCTAATGGAAGAGAAAAATAAACGTAAGAAAGCTCTTTTGGCTAAAGCTATTGCAGAAAGGAAGCGGTTTGACAGGGCTGAAGCAGAGTATGTCACAGCAAAGCTAGATCTACAGCGCAAGACTGAGCTTAAAGAGCAGCTCACTGAGCACCTTTGCACGATCATACAGCAAAACGAGCTCCGCAAGGCCAAGAAGTTGGAGGAGTTGATGCAGCAACTAGATGTGCACGCTGATGAGGAGACTTTGGAGCTCGAGGTGGAGGTGGAGAGACTGCTGTGTGAACAAGAAGCAGAAGTAGGGAAACAAGTGGTTCATTTAGAGAGGCCATTTCAGCCTTCTGGGGAGAGTATGACCTTAGGGTGTGCTAAAGAGAACAAAAAGCATCAAGACCAGGCTGCTTCCCCAAAGGTAGATGAACAGTGTGAAAGCTCCAGTAGCATTGCCCTTCTTGATCCAGACCAGCCAAAGCAAGAAGTGGAAACTACTGTAAAAGACATTTCAGCTGCTCTGACCACATGA

Related Sequences

bmy_03687T0 Protein

Length: 359 aa      View alignments
>bmy_03687T0
SAAAREEPGCAWVAVLAIGALRFGRSRRAGKSRRMAQGWAGFSEEELRRLKQTKDPFEPQRRLVPVKKSRQQLQREKALQEQSQKLGLQDGSTSLPPEQLLSAPKQRFNTQRPCSSPPTPPTLTSPIGDGKPQGIESQPRELGLKNSHEGHKNAEVLPPKPDCKLEKKKVELQGKSRWEVLQQEQRLMEEKNKRKKALLAKAIAERKRFDRAEAEYVTAKLDLQRKTELKEQLTEHLCTIIQQNELRKAKKLEELMQQLDVHADEETLELEVEVERLLCEQEAEVGKQVVHLERPFQPSGESMTLGCAKENKKHQDQAASPKVDEQCESSSSIALLDPDQPKQEVETTVKDISAALTT*