Sequence detailsbmy_03712 (Coding sequence)

Part of scaffold_107 (SequenceType object (1))

For more information consult the page for scaffold_107 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

USP26ENSTTRG00000013670 (Bottlenosed dolphin)

Gene Details

ubiquitin specific peptidase 26

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000012963, Bottlenosed dolphin)

Protein Percentage 72.01%
cDNA percentage 86.25%
Ka/Ks Ratio 1.31118 (Ka = 0.1675, Ks = 0.1277)

USP26ENSBTAG00000021344 (Cow)

Gene Details

Ubiquitin carboxyl-terminal hydrolase

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000028452, Cow)

Protein Percentage 58.9%
cDNA percentage 77.19%
Ka/Ks Ratio 1.08643 (Ka = 0.2978, Ks = 0.2741)

USP26 (Minke Whale)

Gene Details

ubiquitin specific peptidase 26

External Links

Gene match (Identifier: BACU005442, Minke Whale)

Protein Percentage 90.28%
cDNA percentage 93.9%
Ka/Ks Ratio 0.48716 (Ka = 0.0508, Ks = 0.1043)

Additional orthologs identified in other species via the OPTIC pipeline.

USP26 (Human)   Usp26 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2787 bp    Location:381435..378649   Strand:-
Raw sequence 
>bmy_03712
ATGGCTGCTCTAATGGTACATGGTTTTGTCCAAATATGGAACACGAAGACTGGGATAACTGAACTAAATGAAGCATGCGTTGAAATAGTGGAAAGAAGGAGGAAAGTTACGTTGGTTATCTCTCTCAGTACCGGAGAATACACAACTTTTCAGCTAAGTAATAATATTAAAAACATAGTCCTTAGACCCTATGGAGAAGACCAAAATTATCTGCATTTAACTTTCCAAACTAATGACTTATTGTTTATTGAAAGATTATCCTCCAGAGATGCCAAAAAGTTGAAGATGTTCCTGAATAGATTCCATCAAAATCATCTTCAACCACCCGTAAGACCTGATAGGGATGGGAGTATCTTTGCCAGTACAACAATAGAGAAGGTAGGTGAGGGAACTTCGTTTTACAAAACATGTGACACGTCAAGTAGTCAAGCTTTTGAGAAAGAAAGAAATGAAACACCTGATGATAAGAAGATGCCTTTGTTTGCATCAGAATCGTCAACATTTACCTGTGAAGAGTTATTAGAAAATGGATATGGGAAGAGGAAAAGGAAGCCATCATCTGGCTCAGAGATGAATAAGAATTTCCTGCARGAGAATACCTCTGTGAGAAGAAAGAAATCAAAGCTGAACCCCTTGAGATATGTAAGCCACAATAAGAAGAAAAAATTAAGGTTAAAAAGGTCAAAACGGAATAATAAATTGAAACTTGGACCTTCCTTCAAGATCGATTCTACTGGAAACTCTTACCTAGATGTCACTGATCTTCTCCAAAGACTGTCTGAGAAAATATATTTAGCATTTCTCTCAGGATCAGAGTATGGTGAGAATGACCCCGAGTGGAGCAAACTCAATATGATCTTTGACTTTTACCCACAGAAACTATGGCAGGGCCTCCCCAATTTGGGAAACACCTGCTACATGAATGCAGTTTTACAGTCCTTATTTTCCATTCCATCGTTTGCTGATGATTTACTCAAGCTGGGCTTCTCATGGGGTAAAATTCCCCTCGATGCACTTAGCGTATGCTTGGTACGGCTGCTTGTTTTGAAAGATACTTATAACATAAAAATCAAGGAGGAGTTACTTGTGAATATTAAAAAAGCCATTTCAGCAGTTGCAGAGATATTCTCTGACAACATGCAGAATGATGCGCATGAATTTTTAGGTCACTGTTTAGACCAGATGAAACAAAACGTGGGGAAATTAACCGCAACTTGGGAGACTAAGATTGAATCTGAGGAAGGAAACTCACCTCAGCAGATTTCTGCTGGTAGCGCTGACACCAGGGCGCTTGTTTGCCCTGTTCTCAGGAATTTTGATTTCGAGTTGCTGCACTCCATTATTTGCAAAGCCTGTGGGCACGTTGTTCTTAAGACAGAAGTGAACGATTCTCTCTCCGTAAATCTTCCCCAGGGAAAACAAGCACTCCCCTTGTCTATTCAATCTAGTTTCGATCTTTTCTTTGAAGGAGAAGAACTTGAGTATAAATGTGAGAAGTGTAAGCACAGGAGTTCTATTGCAGTGCATACGTTCAGTAGGCTACCCAGGGTCCTCATTGTTCATCTGAAACGCTATAAATTTAATGAGTTTTGGTCCTTAAGGAAGGACGACCAAGAAGTCATTATTTCCAAATATTTAAAGTTATCTTCCCATTGCAATGAAACTACCAAACCGCCGCTTCCCTTAAGCAAGAATGCACCTCTTAGGGATTTCCAAGTCTTAAAAGTCTTTCAAAAGATGAATTCTGAAACCATCAGTTCATTGACAGCTTCAACAAAGCAGACCTCGGAATCCAAGGATTCTTTGGCTCCACACATTAGATCAGACAAAGAGTCTGAACCACAAAAATGCCAGACTCTTCGTAAAGGTTCAAGAGGAGTACAGCAGCAAAAAGACCTGGGAAAGTATTCTAAACTAAATATAATAGAGTCCACATTGGTAAACACAGGACATGGAGCAGCCATTGCAAGAGAGCTATTAGCAGTAGGCTTAATGATGAATCTGGAAGACAGCTCCCTTTCTCTGAAAGGTATACCCACCAGCAGCCCAGATACATGTCACAAAGTGCCTGAAAATCCAAAACTAAAGAAATACAAGAGAACCAATATGTCTGCAGATTTTGAGAGCGTGGCCGAGACCACCGAAGAATTTTGTAAGGATAAAAAAAACAGAATTTCAGAAAAATCTTGCCAAGTGCCTGAAGACACCCAGCCTTATGAAACGATGAGACTCTGTGAACAAGACCTTTGGCTGGCACTGCTTCGAAGACTTCCAAAACCAGATACCCAGTGGTACACAGAGAAATGCAGAAGACCTACGGAATTAAGTTTCCAGGGAGCCAAGGTGAATTCCCTAGGTGCATTGGGTTCCAACGAAGACCCTGGAAACAAGGGCTCTTCAGATGTGGAGAAGATAGAAGCTGCAGCCAAGATACCAAAGAGAGAAGCCAAGATGGGAGATAGTCATGACTATCGGCTCATTGGTGTTATCAGCCATCTTGGAAAGAGATATAGTTCTGGTCACTATATCAGCGATGCCTACAACTTTGAGAGGCAAGAGTGGTTCACTTACAGTGATCTGCAAGTATCAAGTATCCAAGAGGCCCCAATGCAGGAGGCTAGGCTTTGCACTGGCTACATCTTCTTTTACATGCACAATGAGATCTTCGAAGAGCTGTTGGGAAGGGAAGAGAACTCCCAGCCTCATAGCACAGAGGCAGGAGTAGTAAAAGAAGTAGACTCAGGAGTAGTAAAAGAAGTAGACTCCTGGTCAGATTCATCCTCTTGA

Related Sequences

bmy_03712T0 SequenceType object (3)

Length: 929 aa      View alignments
>bmy_03712T0
MAALMVHGFVQIWNTKTGITELNEACVEIVERRRKVTLVISLSTGEYTTFQLSNNIKNIVLRPYGEDQNYLHLTFQTNDLLFIERLSSRDAKKLKMFLNRFHQNHLQPPVRPDRDGSIFASTTIEKVGEGTSFYKTCDTSSSQAFEKERNETPDDKKMPLFASESSTFTCEELLENGYGKRKRKPSSGSEMNKNFLQENTSVRRKKSKLNPLRYVSHNKKKKLRLKRSKRNNKLKLGPSFKIDSTGNSYLDVTDLLQRLSEKIYLAFLSGSEYGENDPEWSKLNMIFDFYPQKLWQGLPNLGNTCYMNAVLQSLFSIPSFADDLLKLGFSWGKIPLDALSVCLVRLLVLKDTYNIKIKEELLVNIKKAISAVAEIFSDNMQNDAHEFLGHCLDQMKQNVGKLTATWETKIESEEGNSPQQISAGSADTRALVCPVLRNFDFELLHSIICKACGHVVLKTEVNDSLSVNLPQGKQALPLSIQSSFDLFFEGEELEYKCEKCKHRSSIAVHTFSRLPRVLIVHLKRYKFNEFWSLRKDDQEVIISKYLKLSSHCNETTKPPLPLSKNAPLRDFQVLKVFQKMNSETISSLTASTKQTSESKDSLAPHIRSDKESEPQKCQTLRKGSRGVQQQKDLGKYSKLNIIESTLVNTGHGAAIARELLAVGLMMNLEDSSLSLKGIPTSSPDTCHKVPENPKLKKYKRTNMSADFESVAETTEEFCKDKKNRISEKSCQVPEDTQPYETMRLCEQDLWLALLRRLPKPDTQWYTEKCRRPTELSFQGAKVNSLGALGSNEDPGNKGSSDVEKIEAAAKIPKREAKMGDSHDYRLIGVISHLGKRYSSGHYISDAYNFERQEWFTYSDLQVSSIQEAPMQEARLCTGYIFFYMHNEIFEELLGREENSQPHSTEAGVVKEVDSGVVKEVDSWSDSSS*