Part of scaffold_107 (Scaffold)

For more information consult the page for scaffold_107 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

GPC4 ENSTTRG00000005947 (Bottlenosed dolphin)

Gene Details

glypican 4

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005626, Bottlenosed dolphin)

Protein Percentage 96.24%
cDNA percentage 96.74%
Ka/Ks Ratio 0.43509 (Ka = 0.0252, Ks = 0.058)

BT.19508 ENSBTAG00000020644 (Cow)

Gene Details

glypican-4 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000027510, Cow)

Protein Percentage 93.23%
cDNA percentage 91.1%
Ka/Ks Ratio 0.12459 (Ka = 0.0382, Ks = 0.307)

GPC4  (Minke Whale)

Gene Details

glypican 4

External Links

Gene match (Identifier: BACU005441, Minke Whale)

Protein Percentage 97.37%
cDNA percentage 97.62%
Ka/Ks Ratio 0.39758 (Ka = 0.0178, Ks = 0.0448)

Genome Location

Sequence Coding sequence

Length: 999 bp    Location:571461..567947   Strand:-
>bmy_03713
ATGTTAGATGCTATGCTGATGGTGGCCGAGAGGTTAGAGGGTCCTTTCAACATTGAATCGGTCATGGATCCCATCGATGTGAAGATTTCGGATGCTATTATGAACATGCAGGAGAACAGCGTGCAGGTGTCTCAGAAGGTAAGGAAGGCCGGGTCCTGGAAAGGAGAGGAAGGGGCCCGCTCCAGCCTGCGATGTCACTTCCGTCACGTGACCACACTTATGCCAATGCAGGTTTTCCAGGGATGTGGACCCCCTAAGCCTCTCCCAGCTGGTCGGATTTCCCGTTCCATCTCYGAAAGTGCCTTCAGTGCCCGCTTCAGACCCTTTCACCCCGAGGAGCGCCCAACCACAGCAGCTGGCACTAGTTTGGACCGACTGGTTACTGATGTCAAGGAGAAACTGAAACAGGCCAAGAAGTTCTGGTCCTCTCTTCCTAGTAACGTCTGCAACGATGAGAGGATGGCTGCAGGAAACGGCAATGAGGATGACTGCTGGAATGGCAAAGGCAAAAGCAGGTACCTGTTTGCAGTGACAGGAAACGGATTAGCCAACCAGGGCAATAATCCGGAAGTCCAGGTTGACACCAGCAAACCGGACATACTGATCCTTCGTCAAATCATGGCTCTTCGAGTTATGACCAGTAAAATGAAGAATGCTTATAATGGGAATGATGTGGACTTCTTTGATATCAGTGATGAGAGCAGTGGAGAAGGAAGTGGAAGTGGATGTGAGTATCAGCAGTGCCCTTCGGAGTTTGAGTATAATGCAACTGACCACTCTGGGAAGAGTGCCAACGATAAAGCCAGCAGCGCTGGGGTCCCCGCTGGGGCCCGGCCCTACCTCCTCACTGTCTTCTGCATCTTGGCCCTGTTTTGTGGGAAAAGGGGACTTGTACGTAAGTTGCCTTATCTGGAGAGAAGAGGAGCCCCATCTGATCGGAAGGGCAAGGGTCTTGCCATGCATGGTTCACAGCTGTGTGCTACCCTATCAGCCAAGTAG

Related Sequences

bmy_03713T0 Protein

Length: 333 aa      View alignments
>bmy_03713T0
MLDAMLMVAERLEGPFNIESVMDPIDVKISDAIMNMQENSVQVSQKVRKAGSWKGEEGARSSLRCHFRHVTTLMPMQVFQGCGPPKPLPAGRISRSISESAFSARFRPFHPEERPTTAAGTSLDRLVTDVKEKLKQAKKFWSSLPSNVCNDERMAAGNGNEDDCWNGKGKSRYLFAVTGNGLANQGNNPEVQVDTSKPDILILRQIMALRVMTSKMKNAYNGNDVDFFDISDESSGEGSGSGCEYQQCPSEFEYNATDHSGKSANDKASSAGVPAGARPYLLTVFCILALFCGKRGLVRKLPYLERRGAPSDRKGKGLAMHGSQLCATLSAK*