Part of scaffold_107 (Scaffold)

For more information consult the page for scaffold_107 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CCDC160 ENSTTRG00000009934 (Bottlenosed dolphin)

Gene Details

coiled-coil domain containing 160

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009422, Bottlenosed dolphin)

Protein Percentage 78.66%
cDNA percentage 82.71%
Ka/Ks Ratio 0.40449 (Ka = 0.1238, Ks = 0.306)

CCDC160 ENSBTAG00000036349 (Cow)

Gene Details

Coiled-coil domain-containing protein 160

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000047500, Cow)

Protein Percentage 85.45%
cDNA percentage 92.05%
Ka/Ks Ratio 0.70997 (Ka = 0.0741, Ks = 0.1043)

CCDC160  (Minke Whale)

Gene Details

coiled-coil domain containing 160

External Links

Gene match (Identifier: BACU005439, Minke Whale)

Protein Percentage 95.08%
cDNA percentage 97.64%
Ka/Ks Ratio 0.94888 (Ka = 0.0206, Ks = 0.0217)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1368 bp    Location:1389062..1397681   Strand:+
>bmy_03716
ATGGGTGGGGCTGCCTCGCAGTTTCTCGCCCCTTCCCGCCCTGACTCAGCTCTCTTGATCTTCGAGCTCGGCTTTCGCAGCGCCCGGCCCGGCGCTCTGGGCAGCGGCGCGCGGGTCCCTTTAAATCGGGCTGGCCGGTTGCCAGGCAACGGCGCGGCCCGCGCTGGCCCTGCACTGCAGAGGCTGTGCCCGGGGCCGGTCCGGCCGGGTCGCGTTGGCCAGCGCCGAACCCAGGGCAGCCGCCCGCCGCTGGTGGCCGTCTTCAGGGAAGAGGGGCCAGGGCCCACCGGACCCCACCCACGCCGCCAGTTCAATCTGGAAAGGAGAACAGCGRCATCAGATAGAAGACCTTGGACATCAGGAACTGAATTGGAAAAGGTGCCTGAAGAAATGGATGCTAGAAGAAAACACTGGAAGGAGAATATGTTTGCTCCTTTTTTTAGTGCACAGGATATTCTAGATGAGGCTTCTCAGCTTGAACCTTCTTCTGAACAAATGACTTTAGGTAAGGCCAGGAGAATGGAAGGGATTTTTAATTTGTCTAGTAGAAAGTKTCGAGAAGAAAATAAATTTAAAAGGAAAGAATTTATTTCTCAACCAAATGAAAATGAACAAGAACCAAATTTAAGAGAGMGAAAGATAAACATTTCAAAGAATGAGGCAGACACAAATTCTGCCTCCCGTGAGTCATCTAATTTGGACATTGCAACTGAAGAAAGCTTTAATAGTGCAGAAGAGCCTCTTAGCTGGGGTACAAAGGAATTATCAACTCCACCASGAAAAGACAAGAAGAAGAAATTCACTGAAGGAATGTCTCCAAAACTTCGCCTGAATCTTTTGAATGAAGAGCTGGAAGCGCTTAATATGAAATGCAGAAAAATAGAAGAGGAATTCGAAAATGCGGAAAAAGAACTTTTGAACTACAAAAAAGAAGTCTCCTCAAAACCCCTAAATTTTCAAGAAGCAGGGATGGAAACTTCCAAGAAAGACTGGGAACTTCAAGCTTTAAGAAATGACCTCTCTGAAAAAGCAACAAATGTTAAAAACTTAACAGAAGAGCTCCAGCAAGCCAAAGAGGTCATCCACAAGTTGAGCCTTGAGAATAAGGATTTAAAAGAAGCTGTTAGGAAGTTAAAGCAGCAAACTGAGGTTGGAAATGCACTCCTAAAGGAAGAAGTGAAATTGTATTATGAATTAGAAATGGAAAAGGTCCACGGAGAGCTCAACGCCATCAAGAATGAACTGAGAGCGGAGAAGACCCTACAAGCAAGAAACAACAGAGCCCTGGAGTTGCTTAGAAAACACTTTGCTTCTGTAACGTCATCAGGTACCCCTGACAGCTTTATGGGGGACTTTTTTTTAAAATAA

Related Sequences

bmy_03716T0 Protein

Length: 456 aa      View alignments
>bmy_03716T0
MGGAASQFLAPSRPDSALLIFELGFRSARPGALGSGARVPLNRAGRLPGNGAARAGPALQRLCPGPVRPGRVGQRRTQGSRPPLVAVFREEGPGPTGPHPRRQFNLERRTAXSDRRPWTSGTELEKVPEEMDARRKHWKENMFAPFFSAQDILDEASQLEPSSEQMTLGKARRMEGIFNLSSRKXREENKFKRKEFISQPNENEQEPNLRERKINISKNEADTNSASRESSNLDIATEESFNSAEEPLSWGTKELSTPPXKDKKKKFTEGMSPKLRLNLLNEELEALNMKCRKIEEEFENAEKELLNYKKEVSSKPLNFQEAGMETSKKDWELQALRNDLSEKATNVKNLTEELQQAKEVIHKLSLENKDLKEAVRKLKQQTEVGNALLKEEVKLYYELEMEKVHGELNAIKNELRAEKTLQARNNRALELLRKHFASVTSSGTPDSFMGDFFLK*