Part of scaffold_114 (Scaffold)

For more information consult the page for scaffold_114 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SF3A1 ENSTTRG00000001535 (Bottlenosed dolphin)

Gene Details

splicing factor 3a, subunit 1, 120kDa

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001448, Bottlenosed dolphin)

Protein Percentage 90.18%
cDNA percentage 93.06%
Ka/Ks Ratio 0.56762 (Ka = 0.0625, Ks = 0.1102)

SF3A1 ENSBTAG00000003390 (Cow)

Gene Details

Splicing factor 3A subunit 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000004398, Cow)

Protein Percentage 90.33%
cDNA percentage 87.9%
Ka/Ks Ratio 0.13323 (Ka = 0.0606, Ks = 0.4552)

Genome Location

Sequence Coding sequence

Length: 2019 bp    Location:350113..403480   Strand:+
>bmy_03781
ATGCCGGCCGGACCCGTGCAGGCGGTGCCCCCGCCGCCGCCCACGGCCACCGAGCCCAAACAGCCCACGGAAGAGGAAGCATCTTCAAAGGAGGATTCTGCCCCTTCCAAGCCAGTGGTGGGTATTATTTACCCTCCTCCAGAGGTCAGGAATATCGTTGACAAGACTGCCAGCTTCGTGGCCAGAAACGGACCTGAATTTGAAGCTAGGATACGACAGAACGAGATCAACAACCCCAAGTTCAACTTCCTGAACCCCAATGACCCTTACCATGCCTACTACCGCCACAAGGTCAGCGAGTTCAAGGAGGGGAAAGCCCAGGAGCCCTCGGCTGCCGTCCCCAAGGTCATGCAGCAGGAGCAAGCCACCCCGCAGCAGCTGCCCCGGAAGGTTCAAGCCCAAGTGATCCAAGAGACCATCATGCCCAAAGAGCCCCCTCCCGAGTTCGAGTTCATTGCAGACCCCCCCTCCATCTCAGCCTTCGACCTGGACGTGGTGAAGCTGACGGCTCAGTTTGTGGCCAGGAATGGGCGCCRGTTTCTGACCCAGCTGATGCAGACAGAGCAGAGCAGCTACCACTATGACTTCCTTCGCCCGCAACACAGCCTTTTCAACTACTTCAYGAAGCTGGTGGAACAGTATACCAAGATCTTGATTCCACCCAAAGGCTTATTTACCAAGCTCAAGAAAGAGGCAGAGAACCCCCGGGAAGTTTTGGACCAGGTGTGTTACCGAGTGGAGTGGGCCAAGTTTCAGGAGCGTGAGAGGAAGAAGGAAGAGGAGGAGAAGGAAAAGGAACGGGTGGCCTATGCTCAGATTGACTGGCATGATTTTGTGGTGGTGGAAACAGTGGACTTCCAACCCAATGAGCAAGGGAACTTCCCTCCCCCCACCACCCCAGAGGAGCTGGCGGCCCGAATCCTCATTCAGGAGCGCTACGAGAAGTTTGGGGAGAGCGAGGAGGTCGAGATGGAGGTCGAGTCTGATGAGGAGGACGAGAAACAGGAGAAGGCGGAGGAGCCTCCGTCCCAGCTGGACCAGGACACCCAAGTGCAAGACATGGATGAGGGTTCAGATGATGAAGAAGAAGGACAGAAAGTGCCCCCACCTCCAGAGACACCCATGCCACCGCCTCTGCCCCCACCTCCAGACCAGGTCATTGTCTGGAAGGACTATGACCCAAAAGCTTCCAAGCCCCTGCCTCCAGCCCCTGCTCCAGATGAATATCTCGTGTCCCCCATCACTGGGGAGAAGATCCCTGCCAGCAAAATGCAGGAACACATGCGCATTGGGCTTCTTGACCCCCGTTGGCTGGAGCAGCGAGATCGCTCCATTCGTGAGAAGCAGAGTGATGATGAGGTGTACGCACCAGGTCTGGATATTGAGAGCAGCTTGAAACAGCTGGCTGAGCGGCGTACCGACATCTTTGGTGTAGAGGAAACGGCCATTGGTAAGAAGATTGGCGAGGAGGAGATCCAGAAGCCAGAGGAAAAGGTGACCTGGGATGGCCATTCCGGCAGCATGGCCCGGACGCAGCAGGCTGCCCAGGCCAATATCACCCTCCAGGAGCAGATCGAGGCCATCCACAAGGCTAAGGGCTTGGTGCCAGAAGATGATACCAAAGAGAAGATTGGCCCCAGCAAGCCCAATGAAATCCCCCAGCAGCCACCACCTCCATCTTCAGCCACCAACATCCCCAGCTCAGCCCCACCCATTACCTCGGTGCCCCGGCCACCCGCGATGCCACCTCCCGTCCGTACCACAGTTGTGTCTGCAGTACCCGTCATGCCCCGGCTCCCGATGGCATCAGTGGTCCGACTGCCCCCCGGCTCGATCGATAGTTTCCCCAATACTCTAGCACTTTTCAAACTTTTCCGCTATAAAACTACTTTGGATGCTACAGGCAAATATGTACTCAACACCCATTTCTATCCACCTCCCCCAAGAGATCAAGGGCATAAGCCCAAACAGCCAGAAGTGAAAATGTGGGTTGGTACTGACTTCTATTCCATGATCTAG

Related Sequences

bmy_03781T0 Protein

Length: 673 aa      View alignments
>bmy_03781T0
MPAGPVQAVPPPPPTATEPKQPTEEEASSKEDSAPSKPVVGIIYPPPEVRNIVDKTASFVARNGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVSEFKEGKAQEPSAAVPKVMQQEQATPQQLPRKVQAQVIQETIMPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRXFLTQLMQTEQSSYHYDFLRPQHSLFNYFXKLVEQYTKILIPPKGLFTKLKKEAENPREVLDQVCYRVEWAKFQERERKKEEEEKEKERVAYAQIDWHDFVVVETVDFQPNEQGNFPPPTTPEELAARILIQERYEKFGESEEVEMEVESDEEDEKQEKAEEPPSQLDQDTQVQDMDEGSDDEEEGQKVPPPPETPMPPPLPPPPDQVIVWKDYDPKASKPLPPAPAPDEYLVSPITGEKIPASKMQEHMRIGLLDPRWLEQRDRSIREKQSDDEVYAPGLDIESSLKQLAERRTDIFGVEETAIGKKIGEEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVPEDDTKEKIGPSKPNEIPQQPPPPSSATNIPSSAPPITSVPRPPAMPPPVRTTVVSAVPVMPRLPMASVVRLPPGSIDSFPNTLALFKLFRYKTTLDATGKYVLNTHFYPPPPRDQGHKPKQPEVKMWVGTDFYSMI*