Sequence detailsbmy_03781 (Coding sequence)

Part of scaffold_114 (SequenceType object (1))

For more information consult the page for scaffold_114 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SF3A1ENSTTRG00000001535 (Bottlenosed dolphin)

Gene Details

splicing factor 3a, subunit 1, 120kDa

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000001448, Bottlenosed dolphin)

Protein Percentage 90.18%
cDNA percentage 93.06%
Ka/Ks Ratio 0.56762 (Ka = 0.0625, Ks = 0.1102)

SF3A1ENSBTAG00000003390 (Cow)

Gene Details

Splicing factor 3A subunit 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000004398, Cow)

Protein Percentage 90.33%
cDNA percentage 87.9%
Ka/Ks Ratio 0.13323 (Ka = 0.0606, Ks = 0.4552)

Genome Location

Sequence SequenceType object (2)

Length: 2019 bp    Location:350113..403480   Strand:+
Raw sequence 
>bmy_03781
ATGCCGGCCGGACCCGTGCAGGCGGTGCCCCCGCCGCCGCCCACGGCCACCGAGCCCAAACAGCCCACGGAAGAGGAAGCATCTTCAAAGGAGGATTCTGCCCCTTCCAAGCCAGTGGTGGGTATTATTTACCCTCCTCCAGAGGTCAGGAATATCGTTGACAAGACTGCCAGCTTCGTGGCCAGAAACGGACCTGAATTTGAAGCTAGGATACGACAGAACGAGATCAACAACCCCAAGTTCAACTTCCTGAACCCCAATGACCCTTACCATGCCTACTACCGCCACAAGGTCAGCGAGTTCAAGGAGGGGAAAGCCCAGGAGCCCTCGGCTGCCGTCCCCAAGGTCATGCAGCAGGAGCAAGCCACCCCGCAGCAGCTGCCCCGGAAGGTTCAAGCCCAAGTGATCCAAGAGACCATCATGCCCAAAGAGCCCCCTCCCGAGTTCGAGTTCATTGCAGACCCCCCCTCCATCTCAGCCTTCGACCTGGACGTGGTGAAGCTGACGGCTCAGTTTGTGGCCAGGAATGGGCGCCRGTTTCTGACCCAGCTGATGCAGACAGAGCAGAGCAGCTACCACTATGACTTCCTTCGCCCGCAACACAGCCTTTTCAACTACTTCAYGAAGCTGGTGGAACAGTATACCAAGATCTTGATTCCACCCAAAGGCTTATTTACCAAGCTCAAGAAAGAGGCAGAGAACCCCCGGGAAGTTTTGGACCAGGTGTGTTACCGAGTGGAGTGGGCCAAGTTTCAGGAGCGTGAGAGGAAGAAGGAAGAGGAGGAGAAGGAAAAGGAACGGGTGGCCTATGCTCAGATTGACTGGCATGATTTTGTGGTGGTGGAAACAGTGGACTTCCAACCCAATGAGCAAGGGAACTTCCCTCCCCCCACCACCCCAGAGGAGCTGGCGGCCCGAATCCTCATTCAGGAGCGCTACGAGAAGTTTGGGGAGAGCGAGGAGGTCGAGATGGAGGTCGAGTCTGATGAGGAGGACGAGAAACAGGAGAAGGCGGAGGAGCCTCCGTCCCAGCTGGACCAGGACACCCAAGTGCAAGACATGGATGAGGGTTCAGATGATGAAGAAGAAGGACAGAAAGTGCCCCCACCTCCAGAGACACCCATGCCACCGCCTCTGCCCCCACCTCCAGACCAGGTCATTGTCTGGAAGGACTATGACCCAAAAGCTTCCAAGCCCCTGCCTCCAGCCCCTGCTCCAGATGAATATCTCGTGTCCCCCATCACTGGGGAGAAGATCCCTGCCAGCAAAATGCAGGAACACATGCGCATTGGGCTTCTTGACCCCCGTTGGCTGGAGCAGCGAGATCGCTCCATTCGTGAGAAGCAGAGTGATGATGAGGTGTACGCACCAGGTCTGGATATTGAGAGCAGCTTGAAACAGCTGGCTGAGCGGCGTACCGACATCTTTGGTGTAGAGGAAACGGCCATTGGTAAGAAGATTGGCGAGGAGGAGATCCAGAAGCCAGAGGAAAAGGTGACCTGGGATGGCCATTCCGGCAGCATGGCCCGGACGCAGCAGGCTGCCCAGGCCAATATCACCCTCCAGGAGCAGATCGAGGCCATCCACAAGGCTAAGGGCTTGGTGCCAGAAGATGATACCAAAGAGAAGATTGGCCCCAGCAAGCCCAATGAAATCCCCCAGCAGCCACCACCTCCATCTTCAGCCACCAACATCCCCAGCTCAGCCCCACCCATTACCTCGGTGCCCCGGCCACCCGCGATGCCACCTCCCGTCCGTACCACAGTTGTGTCTGCAGTACCCGTCATGCCCCGGCTCCCGATGGCATCAGTGGTCCGACTGCCCCCCGGCTCGATCGATAGTTTCCCCAATACTCTAGCACTTTTCAAACTTTTCCGCTATAAAACTACTTTGGATGCTACAGGCAAATATGTACTCAACACCCATTTCTATCCACCTCCCCCAAGAGATCAAGGGCATAAGCCCAAACAGCCAGAAGTGAAAATGTGGGTTGGTACTGACTTCTATTCCATGATCTAG

Related Sequences

bmy_03781T0 SequenceType object (3)

Length: 673 aa      View alignments
>bmy_03781T0
MPAGPVQAVPPPPPTATEPKQPTEEEASSKEDSAPSKPVVGIIYPPPEVRNIVDKTASFVARNGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVSEFKEGKAQEPSAAVPKVMQQEQATPQQLPRKVQAQVIQETIMPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRXFLTQLMQTEQSSYHYDFLRPQHSLFNYFXKLVEQYTKILIPPKGLFTKLKKEAENPREVLDQVCYRVEWAKFQERERKKEEEEKEKERVAYAQIDWHDFVVVETVDFQPNEQGNFPPPTTPEELAARILIQERYEKFGESEEVEMEVESDEEDEKQEKAEEPPSQLDQDTQVQDMDEGSDDEEEGQKVPPPPETPMPPPLPPPPDQVIVWKDYDPKASKPLPPAPAPDEYLVSPITGEKIPASKMQEHMRIGLLDPRWLEQRDRSIREKQSDDEVYAPGLDIESSLKQLAERRTDIFGVEETAIGKKIGEEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVPEDDTKEKIGPSKPNEIPQQPPPPSSATNIPSSAPPITSVPRPPAMPPPVRTTVVSAVPVMPRLPMASVVRLPPGSIDSFPNTLALFKLFRYKTTLDATGKYVLNTHFYPPPPRDQGHKPKQPEVKMWVGTDFYSMI*