Sequence detailsbmy_03782 (Coding sequence)

Part of scaffold_114 (SequenceType object (1))

For more information consult the page for scaffold_114 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SNTNENSTTRG00000012666 (Bottlenosed dolphin)

Gene Details

sentan, cilia apical structure protein

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000012014, Bottlenosed dolphin)

Protein Percentage 76.3%
cDNA percentage 79.01%
Ka/Ks Ratio 0.80022 (Ka = 0.0212, Ks = 0.0265)

SNTNENSBTAG00000013026 (Cow)

Gene Details

sentan

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000017319, Cow)

Protein Percentage 71.32%
cDNA percentage 77.21%
Ka/Ks Ratio 0.50029 (Ka = 0.2349, Ks = 0.4696)

Additional orthologs identified in other species via the OPTIC pipeline.

SNTN (Human)   Sntn (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 411 bp    Location:406971..390795   Strand:-
Raw sequence 
>bmy_03782
ATGGAACGAATGACAATAATGCTGATATCAATACCCAAACTCCCAGAATCATTATGTTTCTATCATTTTGTTGGCAGCATTTCAATATCCAAACAACTGGCTTCAATAAAAGCTCTACGCAAGGGTTCAGATCTGGAAAAAGCCATCGCCACTGCCGCTATGATTTTCAGAAACTTTTCTGACCCTGATGGTAAACTTGGGAAAGCTACTGCCAAAAATCTACTGCAAACCCAATTTAGGAATTTCACAGAGGGACAAGAAACCAAACCAAGATACAAAGACCTCCTTTCTGAACTCGACGAACATACAGAAAATAAGCTGGATTTTGAGGWTTTCATGATCTTACTGTTAAGCATCACTGTAATGTCAGATTTGCTACAAAATATATGGAGTGTAAAAATTATGCAATAA

Related Sequences

bmy_03782T0 SequenceType object (3)

Length: 137 aa      View alignments
>bmy_03782T0
MERMTIMLISIPKLPESLCFYHFVGSISISKQLASIKALRKGSDLEKAIATAAMIFRNFSDPDGKLGKATAKNLLQTQFRNFTEGQETKPRYKDLLSELDEHTENKLDFEXFMILLLSITVMSDLLQNIWSVKIMQ*