Part of scaffold_116 (Scaffold)

For more information consult the page for scaffold_116 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

COL4A3 ENSTTRG00000015056 (Bottlenosed dolphin)

Gene Details

collagen, type IV, alpha 3 (Goodpasture antigen)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014273, Bottlenosed dolphin)

Protein Percentage 82.56%
cDNA percentage 85.41%
Ka/Ks Ratio 0.74575 (Ka = 0.1118, Ks = 0.1499)

COL4A3 ENSBTAG00000021316 (Cow)

Gene Details

collagen alpha-3(IV) chain precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000028418, Cow)

Protein Percentage 80.84%
cDNA percentage 84.29%
Ka/Ks Ratio 0.55755 (Ka = 0.1486, Ks = 0.2666)

COL4A3  (Minke Whale)

Gene Details

collagen, type IV, alpha 3 (Goodpasture antigen)

External Links

Gene match (Identifier: BACU001389, Minke Whale)

Protein Percentage 86.69%
cDNA percentage 89.21%
Ka/Ks Ratio 0.77287 (Ka = 0.1073, Ks = 0.1389)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 4134 bp    Location:1051032..1184232   Strand:+
>bmy_03793
ATGCGCGCTGGGACTGCGCCGAGGCCGCCGGCGCTGCTACTTCTGCTGCAGCTGGTGCTCCTGGTGGCCGCGCCCACTGCCGGCAAGGGCTGTGTCTGTACAGACAAAGGCCAGTGCTTCTGTGATGGGGCCAAGGGGGAGAAGGGGGAGAAAGGCTTTCCAGGACCCCCTGGGCCTCCCGGCCAGAAAGGATACCCAGGTCCGGAAGGCCTGCCTGGACCACAGGGACCCAAGGGAACAACTGGGTTACCAGGATTTTCAGGTCCTCCTGGACTTCCAGGTGCCGTTGGTTTGAAAGGAGAGAAAGGGGCTCCCGCTGAAGGAGAAGGTGTAGCCCTTGATGGAAAAGGTGACCGTGGGTTGCCAGGAGCTCCAGGATTCCAGGGTTTGCCGGGCCTTCCAGGTTTTCCTGGACCTATTGGTCCACCTGGCCCTCCAGGATTCTTTGGCTTTCCAGGAACCATGGGACCTCCAGGACCTAAGGGTCACATGGGCGATAAAGTGATAGGACAAAAAGGAGAGCGGGGTATGAAAGGATTAACAGGACCGCCCGGACCACCAGGAACAGTTATCGTGACACTAACCGGCCTGGTTAACAGAACGGACCTCAAGGGGGAGAAGGGAGACCAGGGAGCCGTGGGCCAGTCTGGACGCCCTGGACCCTCAGGGCCACCTGGAGAATCTTACAGATCAGAAAAAGGTGCTCCTGGAGAACCAGGCCCACAGGGAAAGCCTGGAAAAGATGGTGCCCCCGGTTTCCCTGGCACTGAGGGAGCCAAAGGCAGCAAGGGTTTCCCTGGGTTAAGGGGCGAAGATGGCATTAAGGGATGGAAAGGAGACATGGGCCCTCCAGGATTTCGTGGTCCAACAGAATATTATGATGCATACCAGGAAAAGGGAGATGAAGGAATTCCAGGCCCACCAGGGCCCAAGGGAGCTCCTGGCCCACAGGGTCCCAGTGGTCCCCCCGGAGTCCCTGGAAGTCCTGGGTCATCAAGGCCTGGCCTGCAAGGACCCCCTGGAGTACCAGGAGTAAAAGGAAGTAAAGGGGAGCGAGGACCCCCAGGAAAGAACGCAACGGGTCTTCCCGGGTCCCCTGGCTGTCCTGGTTCACCAGGCCCTACAGGGTTGCCAGGACCTCCAGGACCACCAGGTGGTATTGTTTTTCGCAGAGGTCCACCTGGAGACGGTGGACTTCCAGGCCATACAGGGTCTCCAGGAATCCCAGGAGTCGATGGGCCCAAAGGGGAGCCAGGCCTTTTGTGCACACAGTGTCCTTGTGTCCCGGGGCCTCCAGGCCCCCCAGGATTGCCGGGGTTAGATGGCGTAAAAGGATTCCCAGGAAGACAAGGGGCAGCTGGCATTAAAGGAATCCCAGGGTCCCCAGGAAGCGCTGGTCTTCCAGGATTTCCAGCCCTGAGTGGGGAGAAGGGGGACCAGGGTCTTCCAGGGGATCCTGGCATCCCTGGGTCCCCAGGACCTGCAGGACCGGCTGGACCATCCGACTATGGACCTTGGGGAGAGCCTGGTCCAAAGGGCACCCAAGGACTTCCTGGAGCCCCTGGACCACCTGGAGAAGCCGGTTGTTTTGAGGCCTATGGAAGCAGATTATTTTTTATATTCCTTAGGGTATCCCTGGATCCACAGGAAAATGTGATCTGGGTCTTCCTGGGCCTGATGGTGAACCAGGAATTCCAGGAATCGGATTCCCTGGGCCTCCTGGACCTAAGGGAGACCAAGGTTTTCCAGGAACAAAAGGATCACCAGGCTGTCCTGGAGAAATGGGAAAGCCAGGGTTACCTGGAAAGCCAGGCCTCCCAGGAGTCAAGGTCTTTGAGAATTAAAATTCAGACTGATATTGGGGAGGGGAGGGGAGGGGCGATTACAGGAGAACCAGGACTAGCCATGCCTGGAGAACCAGGAGCACCAGGTTTGCCAGGAGAAAGAGGCAACTCTGGGGAAAATGGAGAAATCGGACTCCCTGGACTTCCAGGTCTCCCTGGAATTCCAGGAACTGGAGGGTTTGATGGACCACGAGGGGATCCAGGGCAACCTGGACCACCGGGAGAAAGAGGCCCCCCAGGAAGGTGCAAAGAAAGTCTCAGTGGAGCTCAAGGACTTCCAGGCTTAAATGGATTGAAAGGGCAACAAGGCAGAAGAGGCGAAACGGGGCCAAAGGGAGACCCAGGTATTCCAGGCTTGGATAGGTCAGGATTTCCTGGAGAACCTGGACCACCAGGAATGCCGGGTCATCGAGGGGAGATGGGACCACCTGGTACGAAAGGATATCCAGGAAATCCAGGATTTTTAGGGCCACCAGGTGAAAAAGGAATGATTGGGATGATGGGGTTTCCCGGAAACATTGGCCCTCCAGGGCCTCCTGGGAACCCAGGCACCCTGGGACAGAGGGGTACTAAAGGAATGAAGGGAACTATGGGATTCCCAGGTCTAGCTGGAAGACCAGGCCTCCCAGGTACTCATGGTCTCCAAGGAGATAAAGGAGAGCCAGGTTATTCAGAAGGTACAAGGCCAGGACCACCAGGACCAAAGGGAGATCCAGGATTGCCAGGTGACATGGGAAAGAAAGGTGATAGAGGGCCACCTGGCACACCTGGACGTTCGGGCCCTGCTGCACCAGAGGGAGTTCCTGGGAATCCCGGAAGCCCTGGCCACCCAGGAAAGCCCGGTCCTGATGGTGATTTGGGGTCTAAAGGAATCAAAGGTTTCCCTGGCTCTCCAGGAATAAAAGGCCCTCCAGGTTCCATTTTTGCCCTCCAGGATTACCAGGAAATCCTGGACCAGCGGGTGAGAGAGGTAATCAAGGACGTGATGGAATTCCTGGTCCAGCTGGAGAAAAAGGAGAAACAGGTTTGGTGGGAGCACTTCCAGGCCCAAGAGGGAAACCTGGTCCTCAAGAACCTGCGAAGCCCCCCRAGTGGCAATACTGACAGGCTTTTTGTGAATTCAGGTGAGCCTGGTCCYCCTGGACCTCAAGGGAGTCSCGTAGAAAGCATAAAAGGAGACAAGGGATTTATGGGCCAGCCTGGCCCAAGAGGTCCGCCTGGAACTGTAGGAGACATGGGGCCACCAGGTCATCCGGGAGCACCAGGTGCCCCAGGTCTGCCAGGGGTCAGAGGTGATCCTGGATTCTATGGATTTCCAGGCATGAAAGGGGAGAAGGGTAATTCAGGATTTCTGGGACCAAGTGGACCTCCAGGGCGAATTGGGCCAAAAGGACCACCTGGTGTACGTGGAGACCCTGGCACAGTGAAGATCATCTCCCTTCCAGGAAGCCCAGGCCCACCTGGCCCAGCTGGAGAACCAGGGATGCAAGGAGAACCTGGGCCCCTGGGGCTACYGGGAAACTCAGGACCGCCTGGATCCGATGGCCTGCCAGGCTTGAAGGGGAGACCTGGAGACACTGGACCACCTGCAAGGGGGACAACGATGAGGGGCTTTGTCTTCACCCGGCACAGCCAGACCACGGCGGTTCCCTCCTGTCCAGAAGGGACAGAACCACTCTATAGTGGGTTTTCTCTTCTCTTTGTACAAGGAAATGAACAATCCCATGGACAGGACCTGGGAACTCTTGGCAGCTGCCTGCAGAGATTTACTACAATGCCATTCTTATTCTGCAATATCAATGATGTATGTAATTTCGCATCTCGAAACGATTATTCATACTGGCTGTCAACACCAGCTCTGATGCCAGTGGACATGGCTCCAATTACTGGCCGGGCCCTGGAGCCTTATATTAGCAGATGCTCCGTCTGTGAAGGTCCTGCCATTGCCATAGCTGTTCACAGCCAAACTACTGATATCCCCTCCTGTCCTCCTGGCTGGATTTCTCTCTGGAAAGGATTTTCTTTCATCATGTTCACAAGTGCAGGTTCAGAGGGCGCTGGGCAGGCACTGGCATCCCCCGGCTCCTGCTTAGAAGAATTCCGAGCCAGTCCATTTATAGAATGTCATGGAAGAGGAACATGCAACTACTATTCAAATTCCTACAGTTTCTGGTTGGCTTCATTAGACCCCAAAAGAATGTTCAGAAAACCTATTCCATCAACTGTGAAAGCTGGGGAGTTAGAAAAGATAATAAGTCGCTGTCAGGTGTGCATGAAGAGGAGACATTGA

Related Sequences

bmy_03793T0 Protein

Length: 1378 aa      View alignments
>bmy_03793T0
MRAGTAPRPPALLLLLQLVLLVAAPTAGKGCVCTDKGQCFCDGAKGEKGEKGFPGPPGPPGQKGYPGPEGLPGPQGPKGTTGLPGFSGPPGLPGAVGLKGEKGAPAEGEGVALDGKGDRGLPGAPGFQGLPGLPGFPGPIGPPGPPGFFGFPGTMGPPGPKGHMGDKVIGQKGERGMKGLTGPPGPPGTVIVTLTGLVNRTDLKGEKGDQGAVGQSGRPGPSGPPGESYRSEKGAPGEPGPQGKPGKDGAPGFPGTEGAKGSKGFPGLRGEDGIKGWKGDMGPPGFRGPTEYYDAYQEKGDEGIPGPPGPKGAPGPQGPSGPPGVPGSPGSSRPGLQGPPGVPGVKGSKGERGPPGKNATGLPGSPGCPGSPGPTGLPGPPGPPGGIVFRRGPPGDGGLPGHTGSPGIPGVDGPKGEPGLLCTQCPCVPGPPGPPGLPGLDGVKGFPGRQGAAGIKGIPGSPGSAGLPGFPALSGEKGDQGLPGDPGIPGSPGPAGPAGPSDYGPWGEPGPKGTQGLPGAPGPPGEAGCFEAYGSRLFFIFLRVSLDPQENVIWVFLGLMVNQEFQESDSLGLLDLRETKVFQEQKDHQAVLEKWESQGYLESQASQESRSLRIKIQTDIGEGRGGAITGEPGLAMPGEPGAPGLPGERGNSGENGEIGLPGLPGLPGIPGTGGFDGPRGDPGQPGPPGERGPPGRCKESLSGAQGLPGLNGLKGQQGRRGETGPKGDPGIPGLDRSGFPGEPGPPGMPGHRGEMGPPGTKGYPGNPGFLGPPGEKGMIGMMGFPGNIGPPGPPGNPGTLGQRGTKGMKGTMGFPGLAGRPGLPGTHGLQGDKGEPGYSEGTRPGPPGPKGDPGLPGDMGKKGDRGPPGTPGRSGPAAPEGVPGNPGSPGHPGKPGPDGDLGSKGIKGFPGSPGIKGPPGSIFALQDYQEILDQRVREVIKDVMEFLVQLEKKEKQVWWEHFQAQEGNLVLKNLRSPPSGNTDRLFVNSGEPGPPGPQGSXVESIKGDKGFMGQPGPRGPPGTVGDMGPPGHPGAPGAPGLPGVRGDPGFYGFPGMKGEKGNSGFLGPSGPPGRIGPKGPPGVRGDPGTVKIISLPGSPGPPGPAGEPGMQGEPGPLGLXGNSGPPGSDGLPGLKGRPGDTGPPARGTTMRGFVFTRHSQTTAVPSCPEGTEPLYSGFSLLFVQGNEQSHGQDLGTLGSCLQRFTTMPFLFCNINDVCNFASRNDYSYWLSTPALMPVDMAPITGRALEPYISRCSVCEGPAIAIAVHSQTTDIPSCPPGWISLWKGFSFIMFTSAGSEGAGQALASPGSCLEEFRASPFIECHGRGTCNYYSNSYSFWLASLDPKRMFRKPIPSTVKAGELEKIISRCQVCMKRRH*