Part of scaffold_117 (Scaffold)

For more information consult the page for scaffold_117 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SAR1B ENSTTRG00000016864 (Bottlenosed dolphin)

Gene Details

SAR1 homolog B (S. cerevisiae)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015988, Bottlenosed dolphin)

Protein Percentage 92.42%
cDNA percentage 93.77%
Ka/Ks Ratio 0.4554 (Ka = 0.0532, Ks = 0.1168)

SAR1B ENSBTAG00000021226 (Cow)

Gene Details

GTP-binding protein SAR1b

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000028280, Cow)

Protein Percentage 91.92%
cDNA percentage 90.74%
Ka/Ks Ratio 0.20422 (Ka = 0.0553, Ks = 0.2708)

SAR1B  (Minke Whale)

Gene Details

secretion associated, Ras related GTPase 1B

External Links

Gene match (Identifier: BACU020501, Minke Whale)

Protein Percentage 77.02%
cDNA percentage 83.44%
Ka/Ks Ratio 0.48805 (Ka = 0.1575, Ks = 0.3228)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 681 bp    Location:296706..266828   Strand:-
>bmy_03809
ATGCCCCTGCCTGTAGCCGGGCGAGGAAGGGGCTCCTGTTTTCTGCCCTGGAATCTGGCGGCGGGAAAGAGGACGGGCTCCTTTCGTGCTTCGCGGGGCCTCTCTGACGGTCATCCGGATAGGACACCGCTGCTGTCAAACGGATTATATAAGAAAACTGGTAAATTGGTATTTCTTGGATTGGATAATGCGGGAAAAACAACATTGCTACACATGCTAAAAGATGATAGACTTGGACAACATGTCCCAACGTTACATCCCACGTCAGAAGAACTAACCATTGCTGGCATGACATTTACAACTTTTGATCTGGGTGGACATGTTCAAGCTCGAAGAGTGTGGAAAAACTACCTTCCTGCTATCAATGGCATTGTATTTCTGGTGGATTGTGCAGACCATGAAAGGCTGTTAGAATCAAAAGAAGAACTTGATTCACTAATGACAGATGAAACTGTTGCTAATGTGCCTATACTGATTCTTGGAAATAAGATTGACAGACCTGAAGCCATCAGTGAAGAGAGGTTGCGAGAGATGTTTGGTTTATATGGTCAGACAACAGGAAAGGGCAGTGTATCTCTGAAAGAACTGAATGCCCGGCCCTTAGAAGTTTTTATGTGTAGTGTGCTCAAAAGACAAGGCTATGGAGAAGGCTTCCGCTGGATGGCTCAGTACATTGATTAA

Related Sequences

bmy_03809T0 Protein

Length: 227 aa      View alignments
>bmy_03809T0
MPLPVAGRGRGSCFLPWNLAAGKRTGSFRASRGLSDGHPDRTPLLSNGLYKKTGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETVANVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVLKRQGYGEGFRWMAQYID*