Part of scaffold_117 (Scaffold)

For more information consult the page for scaffold_117 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SEC24A ENSTTRG00000016865 (Bottlenosed dolphin)

Gene Details

SEC24 family, member A (S. cerevisiae)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015989, Bottlenosed dolphin)

Protein Percentage 97.67%
cDNA percentage 97.87%
Ka/Ks Ratio 0.37753 (Ka = 0.0148, Ks = 0.0393)

SEC24A ENSBTAG00000018322 (Cow)

Gene Details

Protein transport protein Sec24A

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000040703, Cow)

Protein Percentage 95.09%
cDNA percentage 94.68%
Ka/Ks Ratio 0.19961 (Ka = 0.0277, Ks = 0.1386)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2448 bp    Location:305055..365846   Strand:+
>bmy_03810
ATGTCCCAGCCCGGGATACCGGCCTCTGGCGGCGCCCCCATCGGCCTCCAGGCCCAGAACGGGGCCGCCTGGGCCTCGGGGTCTCCCTACACCAACGGATCTGCACCCCCCTTAGTGAATCCACCTCTGCCTACCACTTTTCAASCAGGAGCTCCTCTTGGGCCCCCTCCAACTGGAGGACCACCTCCAKTGAGGGCCCTTACGCCTCAGAAATCAACACATAGAGCTGTGCCCCAGCCCACCTTTAATTCAGCTAGCAACCAAGAAGGTATTATACCAAATACCAATAATGGATCTATGGTGGTTCACAATAGTTATGATGAAATTGAAGGCGGTGGCTTCTTGGCAACACCACAGCTTACTAATAAGAATCCTACAATGAGCCGAAGTGTTGGATATTCATATCCCTCCTTACCACCTGGTTATCAGAACACAATACCACCTAGTACAACAGGAATGCCACCCTCTTCCTTGAATTATCCAAGTGGTCCACAGGCATTTACTCAGACTCCCTTAGGTGCTAATCATTTACCTGCAAGCATGAGTGGATTAAGTCTACATCCAGAGGGGCTAAGGGTTATCAATCTACTTCAAGAAAGAAACATGCTTCCATTGACACCTTTGCAGCCTCCCGTTCCAAATTTGCATGAAGATATCCAGAAACTCAACTGTAACCCAGAGTTATTTCGATGCACACTGACTAGCATTCCTCAGACTCAGGCCTTACTGAATAAAGCCAAACTTCCTTTGGGACTGCTGCTTCATCCTTTTAAAGACCTAGTGCAATTGCCTGTGGTTACCTCTAGTACAATTGTGAGATGCCGTTCATGCAGGACATACATCAACCCTTTTGTCAGCTTTCTTGATCAAAGGAGATGGAAATGTAACTTATGTTACCGAGTCAATGATGTTCCTGAAGAATTCATGTACAACCCTTTGACCAGAGTCTATGGAGAACCTCACAGAAGACCTGAAGTTCAAAATGCTACTATTGAGTTTATGGCTCCTTCAGAATACATGTTACGACCACCTCAACCTCCAGTGTACCTTTTTGTATTTGATGTGTCTCACAATGCAGTTGAAACTGGATACTTGAATTCAGTTTGCCAGAGTTTGTTAGACAATCTGGATTTGCTTCCTGGCAACACTAGGACAAAAATTGGCTTCATAACATTTGATAGTACAATCCACTTCTACAGCCTTCAAGAAGGTCTATCTCAACCTCAGATGCTAATAGTTTCAGATATTGAAGATGTTTTTATACCTATGCCAGAGAACTTATTAGTAAATTTAAATGAAAGTAAAGAGCTCGTCCAAGATTTACTGAAAACTTTGCCGCAAATGTTCACCAAGACCCTGGAGACCCAGAGTGCCTTGGGTCCAGCCCTTCAGGCTGCCTTTAAGCTGATGTCCCCAACTGGTGGTCGAATGTCTGTTTTTCAAACACAACTCCCAACTCTTGGAGTGGGAGCCCTGAAACCACGAGAGGAACCCAACCAAAGGTCGTCTGCTAAGGAAATTCACTTGACACCATCAACTGACTTCTATAAGAAATTAGCCTTGGATTGTTCTGGTCAGCAGGTAGCTGTTGACTTATTCCTTCTCAGTGGACAGTATTCTGATTTGGCTTCTCTGGGTTGTATTTCTCGGTATTCAGCAGGTAGTGTCTATTATTATCCCTCTTACCACCATCAGCACAACCCAGTGCAAGTGCAGAAATTACAGAAGGAACTACAGAGATACCTCACTCGGAAGATTGGCTTTGAGGCAGTCATGAGGATTCGGTGTACCAAAGGTCTTTCCATTCATACTTTCCATGGGAACTTCTTTGTTCGGTCCACAGACTTACTGTCTTTACCCAATGTAAACCCAGATGCTGGTGCTGTCCCTCACTATCATTTGTGTGTTTTGTCCAAAGGTGAAAGAAGAATTCGTGTTCATACTTTGTGTTTGCCAGTAGTTTCAACTCTAAATGAAGTCTTTCTTGGAGCTGATGTTCAAGCAATTTCAGGGTTATTGGCCAATATGGCTGTTGACAGGTCTGTGACTGCCAGTCTGAGTGATGCTCGGGACGCCCTAGTGAATGCTGTCATAGACTCTCTTTCAGCTTATCGTTCTTCAGTCCTAAGTAACCAGCAGCATGGACTTATGGTTCCTTTTTCTTTGCGGCTTTTCCCACTGTTTGTGTTGGCGCTCCTTAAACAGAAATCATTTCAGACTGGGACAAATGCATGTCTAGATGAACGCATTTTTGCTATGTGTCAAGTGAAAAATCAGCCTTTGGTTTACCTTATGCTCACAACTCATCCCAGTTTGTATAGAGTTGACAATCTCTCAGATGAGGTACTAATGCTTTGGGTTGGAAGAAATTGTGGACAGAATTTTCTCAGTCAAGTTCTAGGAGTTGAAAACTATGCATTAATTCCACAGACTATGGTAAGATTATAA

Related Sequences

bmy_03810T0 Protein

Length: 816 aa      View alignments
>bmy_03810T0
MSQPGIPASGGAPIGLQAQNGAAWASGSPYTNGSAPPLVNPPLPTTFQXGAPLGPPPTGGPPPXRALTPQKSTHRAVPQPTFNSASNQEGIIPNTNNGSMVVHNSYDEIEGGGFLATPQLTNKNPTMSRSVGYSYPSLPPGYQNTIPPSTTGMPPSSLNYPSGPQAFTQTPLGANHLPASMSGLSLHPEGLRVINLLQERNMLPLTPLQPPVPNLHEDIQKLNCNPELFRCTLTSIPQTQALLNKAKLPLGLLLHPFKDLVQLPVVTSSTIVRCRSCRTYINPFVSFLDQRRWKCNLCYRVNDVPEEFMYNPLTRVYGEPHRRPEVQNATIEFMAPSEYMLRPPQPPVYLFVFDVSHNAVETGYLNSVCQSLLDNLDLLPGNTRTKIGFITFDSTIHFYSLQEGLSQPQMLIVSDIEDVFIPMPENLLVNLNESKELVQDLLKTLPQMFTKTLETQSALGPALQAAFKLMSPTGGRMSVFQTQLPTLGVGALKPREEPNQRSSAKEIHLTPSTDFYKKLALDCSGQQVAVDLFLLSGQYSDLASLGCISRYSAGSVYYYPSYHHQHNPVQVQKLQKELQRYLTRKIGFEAVMRIRCTKGLSIHTFHGNFFVRSTDLLSLPNVNPDAGAVPHYHLCVLSKGERRIRVHTLCLPVVSTLNEVFLGADVQAISGLLANMAVDRSVTASLSDARDALVNAVIDSLSAYRSSVLSNQQHGLMVPFSLRLFPLFVLALLKQKSFQTGTNACLDERIFAMCQVKNQPLVYLMLTTHPSLYRVDNLSDEVLMLWVGRNCGQNFLSQVLGVENYALIPQTMVRL*