Part of scaffold_117 (Scaffold)

For more information consult the page for scaffold_117 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NEUROG1 ENSBTAG00000003331 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000004322, Cow)

Protein Percentage 93.88%
cDNA percentage 93.74%
Ka/Ks Ratio 0.08615 (Ka = 0.0257, Ks = 0.2983)

NEUROG1  (Minke Whale)

Gene Details

neurogenin 1

External Links

Gene match (Identifier: BACU004084, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 99.59%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0271)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 738 bp    Location:1125850..1125113   Strand:-
>bmy_03824
ATGCCAGGCCCTCTGGAGACCAGCCTCTCGGACCTCGACTGCGCCAGCAGCAGCAGCAGCACCAGCGACCTGTCCGGCTTCCTCACCGACGAGGAAGACTGTGCCAGGCTCCAACAGCCCACGTCCGCCTCGGGGCCGCCCATGACGGCCCGCAAGGGCTCACCCGGGATTCCCGGGGCGTCGGACACTCCTCGTGCGCAGGACGACGAGCAGGAGCGGCGTCGGCGCAGGGGCCGCGCGCGGGTGCGCTCTGAGGCGCTGCTGCACTCGCTGCGCAGGAGCCGACGCGTCAAGGCCAACGACCGCGAGCGCAACCGCATGCACAACTTGAACGCGGCGCTGGACGCGCTGCGCAGCGTGCTGCCCTCCTTCCCCGACGACACCAAGCTCACCAAGATCGAGACGCTGCGCTTCGCCTACAACTACATCTGGGCTTTGGCCGAGACTCTGCGCCTGGCCGACCAGGGGCTGCCCGGGGGCGGTGCCCGAGAGCGCCTCCTGCCGCCGCAGTGTGCCCCCTGCCTCCCCGGGCCCCCCAGCCCCGCCAGCGACGCGGAGTCCTGGGGCTCCGGGGCCGCCGCCTCCCCCTGCGCCGCTGCCGCCTCGCCACTCTCTGACCCCAGTAGCCCCGCCGCCTCCGAAGACTTCACCTATGGCCCTGGCGACCCGCTTTTTTCCTTCCCGGGCCTGCCCAAAGACTTGCTCCACACGACGCCCTGTTTCATCCCTTACCACTAG

Related Sequences

bmy_03824T0 Protein

Length: 246 aa      View alignments
>bmy_03824T0
MPGPLETSLSDLDCASSSSSTSDLSGFLTDEEDCARLQQPTSASGPPMTARKGSPGIPGASDTPRAQDDEQERRRRRGRARVRSEALLHSLRRSRRVKANDRERNRMHNLNAALDALRSVLPSFPDDTKLTKIETLRFAYNYIWALAETLRLADQGLPGGGARERLLPPQCAPCLPGPPSPASDAESWGSGAAASPCAAAASPLSDPSSPAASEDFTYGPGDPLFSFPGLPKDLLHTTPCFIPYH*