Part of scaffold_117 (Scaffold)

For more information consult the page for scaffold_117 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRPC7 ENSTTRG00000016275 (Bottlenosed dolphin)

Gene Details

transient receptor potential cation channel, subfamily C, member 7

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015427, Bottlenosed dolphin)

Protein Percentage 75.51%
cDNA percentage 80.5%
Ka/Ks Ratio 0.62915 (Ka = 0.2076, Ks = 0.3299)

TRPC7 ENSBTAG00000014638 (Cow)

Gene Details

short transient receptor potential channel 7

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000019490, Cow)

Protein Percentage 75.51%
cDNA percentage 79.0%
Ka/Ks Ratio 0.42989 (Ka = 0.2026, Ks = 0.4713)

TRPC7  (Minke Whale)

Gene Details

transient receptor potential cation channel, subfamily C, member 7

External Links

Gene match (Identifier: BACU018541, Minke Whale)

Protein Percentage 74.86%
cDNA percentage 80.32%
Ka/Ks Ratio 0.7132 (Ka = 0.2174, Ks = 0.3048)

Genome Location

Sequence Coding sequence

Length: 1755 bp    Location:1783815..1710280   Strand:-
>bmy_03835
ATGATTCAGCAGGCAGTAGGCTGCACCTGGACTACAGAGCTGTCAGAGGGAAGGAAGACACAGAAACGACTCGCAGATCCGACAATCAGAAGAGATTTTGAGAAATCCATTGCAGCAGCGTTCAGGAGCCAGGCTTCAGATGGTCAGGGAGCCATAGGGAAGATCAGAAACACAGGATCTCAGAAGCAGAATCAGGCAGGCCTGAACCCTGAGAAGGAGAAACTGCGGGACAATGGAAGACTTCCAGAACGGCTCAATCAGCAGCTACCTGGCAGGGCCCTCCGCTATGTAAATAACCAAGAACACGCCATGGCTGGCTGGGCTAGCACATGCACAAGTGGAAGAGAAGTACCCATGCTTAGAGGCTCCTTGAAAGAGCTTATCAAATCATGCATTGCCGCATCTCATTATTCTTTCGTTGCTCATCCTAACTGTCAACAGCAATTGCTTACCATGTGGTATGAAAATCTCTCAGGCTTACGTCAACAGTCTATCGCTGTGAAACTCCTGGCTGTCTTTGGAGTCTCCCTAGGCCTCCCTTTTCTCGCCATAGCCTATTGGATTGCTCCGTGCAGCAAGTTTTCAGGAATGATTTGGTCCGAATGCAAGGAAATCTGGGAGGAGGGGCCGCGGGAGTACGTGCTGCACCTCTGGAACCTGCTGGATTTCGGAATGCTGTCCATCTTCGTGGCCTCCTTCACCGCAAGATTCATGGCCTTCCTGAAGGCCAGCGAGGCCCAGGTGTACGTGGACCAGCATGTACAGGACGACACGCTGCACAACGTCTCACTCCCGCCAGAAGTGGCCTACTTCACCTACGGTGAGTCGGCGGGTGTTCGGCTACGCCTTCCGCTCCGGGCGCTTCCGGGGCGTGGCCAGGGGCCAAATCTCATTTCTGATGTGGATCCAGGAGCTTTTCCTTACATATTGGATCCTTCCAGGGACAAGTGGTGGCCTTCAGACCCTCAGATCATATCRGAAGGGCTGTATGCGATAGCTGTCGTGCTGAGCTTCTCTCGAATCGCGTACATCCTGCCAGCCAACGAGAGTTTTGGGCCCCTGCAGATCTCCCTGGGGAGAACTGTGAAAGATATCTTCAAGTTCATGGTCATTTTCATCATGGTATTTGTGGCCTTCATGATTGGGATGTTCAATCTGTACTCCTACTACCGAGGTGCAAAGTACAACCCAGCGTTTACAACGGTTGAAGAAAGCTTCAAAACCTTATTTTGGTCCATCTTTGGCTTGTCTGAAGTGATCTCGGTGGTGCTGAAATATGACCACAAATTCATCGAGAACATTGGCTATGTTCTCTACGGCGTTTATAACGTCACCATGGTGGTCGTGCTGCTCAACATGCTAATAGCCATGATCAACAACTCGTATCAGGAAATTGAGAAGACTCGCTACCAGGCTGGCATGAGGAATTCTGAAAACCTGACAGCAAATAACACTTACAGCAAGCCCACCAGATATCAGGTAACCACCCCTTTCCCAGAATCTGGTATCTGCATAATAAGTGGGACCTCCAACGTGACTCGACAGTGTGACAATGTCGGGCGGGTGGTGAGACTTCAGGGAAGCGGCGAACTGAAGGAAATCAAGCAAGATATCTCCAGTCTGCGCTATGAGCTTCTTGAAGAGAAATCTCAAGCTACCGGCGAGCTGGCAGACCTCATCCAACAGCTCAGTGAGAAGTTTGGAAGGAACTTAAACAAAGACCACCTGAGGGTGAACAAGGGCAAAGACATTTAA

Related Sequences

bmy_03835T0 Protein

Length: 585 aa      View alignments
>bmy_03835T0
MIQQAVGCTWTTELSEGRKTQKRLADPTIRRDFEKSIAAAFRSQASDGQGAIGKIRNTGSQKQNQAGLNPEKEKLRDNGRLPERLNQQLPGRALRYVNNQEHAMAGWASTCTSGREVPMLRGSLKELIKSCIAASHYSFVAHPNCQQQLLTMWYENLSGLRQQSIAVKLLAVFGVSLGLPFLAIAYWIAPCSKFSGMIWSECKEIWEEGPREYVLHLWNLLDFGMLSIFVASFTARFMAFLKASEAQVYVDQHVQDDTLHNVSLPPEVAYFTYGESAGVRLRLPLRALPGRGQGPNLISDVDPGAFPYILDPSRDKWWPSDPQIISEGLYAIAVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVIFIMVFVAFMIGMFNLYSYYRGAKYNPAFTTVEESFKTLFWSIFGLSEVISVVLKYDHKFIENIGYVLYGVYNVTMVVVLLNMLIAMINNSYQEIEKTRYQAGMRNSENLTANNTYSKPTRYQVTTPFPESGICIISGTSNVTRQCDNVGRVVRLQGSGELKEIKQDISSLRYELLEEKSQATGELADLIQQLSEKFGRNLNKDHLRVNKGKDI*