Sequence detailsbmy_03863 (Coding sequence)

Part of scaffold_118 (SequenceType object (1))

For more information consult the page for scaffold_118 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

AVILENSTTRG00000008353 (Bottlenosed dolphin)

Gene Details

advillin

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000007912, Bottlenosed dolphin)

Protein Percentage 93.16%
cDNA percentage 94.58%
Ka/Ks Ratio 0.30925 (Ka = 0.0399, Ks = 0.1289)

AVILENSBTAG00000016913 (Cow)

Gene Details

advillin

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000022497, Cow)

Protein Percentage 89.62%
cDNA percentage 90.8%
Ka/Ks Ratio 0.21492 (Ka = 0.0596, Ks = 0.2775)

AVIL (Minke Whale)

Gene Details

advillin

External Links

Gene match (Identifier: BACU008168, Minke Whale)

Protein Percentage 28.81%
cDNA percentage 45.01%
Ka/Ks Ratio 0.11337 (Ka = 0.9273, Ks = 8.1793)

Additional orthologs identified in other species via the OPTIC pipeline.

AVIL (Human)   Avil (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1275 bp    Location:223455..264961   Strand:+
Raw sequence 
>bmy_03863
ATGTCTCTGAGCAGTGCTTTTCAGGCTGTGGGCAACGACCCTGGGATCATCACCTGGAGAATAGAGAAAATGGAGCTGGCGCTGGTGCCCCTGAATGCCCACGGCACCTTCTATGAGGGAGACTGCTACCTCATCCTCTCGACCCGGAGAGTGGGCAGCATCCTCTCCCAGGACATCCACTTCTGGATTGGGAAGGACTCCTCGCAGGATGAGAAGAGCTGCGTAGCCATCTACACTACGCAGCTGGACGACTACTTGGGGGGCAGCCCCGTGCAGCACCGGGAGGTCCAGTGCCACGAGTCCGACACCTTCCGCGGCTACTTCAAGCAGGGCATCATCTACAAGAAGGGGGGTGTGGCCTCTGGGATGAAGCACGTGGAGACCAAYACCTACGACGTGAAGCGGCTGCTGCACGTGAAGGGGAAGAGAAACATCAGGGCCACCGAGGTGGAAATGAGCTGGGACAGTTTTAACCGAGGTGATGTCTTCCTGCTGGACCTTGGGAAGGTCATCATCCAGTGGAATGGCCCAGAGAGCAGCAGCAGGGAGCGTCTGAAGGCTATGCTTCTGGCAAAGGATATTCGGGACAGGGAGCGAGGGGGCCGTGCTGAAATAGGAGTGATCGAGGGAGACAAGGAGGCGGCCAGTCCAGAGCTGATGAAGGTCCTTCAGGACACCCTCGGCCGGCACTCCATTATCAAGCCTGCGGTCCCTGATGAGATCATAGATCAGCAGCAGAAATCAAATATCACGCTGTATCATGTCTCAGACTCAGCTGGGCAGCTGGCGGTCACAGAGGTAGCAACGAGGCCTCTGGTCCAGGGCTTACTGAACCATGATGACTGCTACATCCTGGACCAAAGTGGAACCAAGATCTATGTGTGGAAAGGAAGAGGAGCCACAAAGGTTGAGAAACAGATGGCCATGTCTAAAGCTCTGAACTTCATCAAGATGAAGGGCTACCCCAGCAGTACCAACGTGGAGACCGTCAGTGACGGTGCCGAGTCAGCCATGTTCAAGCAGCTGTTCCAGAAGTGGTCAGTGAAGGAACAGACCGTGGGTCTGGGGAAAACGTTCAGCATTGGTAAAATCGTTAACGTTTTCCAGGATAAATTTGATGTGACTCTGCTGCACACCAAACCAGAGGTGGCAGCCCAGGAAAGAATGGTCGACGACGGCAACGGCAATGTTGAGGTAAGCCCAGTGACCCACATCCCAGGGCAGGCGGCAGCACTGGCCCTCCTGGCTGCTCTGCTGTACAGAAGGGGCACGTGA

Related Sequences

bmy_03863T0 SequenceType object (3)

Length: 425 aa      View alignments
>bmy_03863T0
MSLSSAFQAVGNDPGIITWRIEKMELALVPLNAHGTFYEGDCYLILSTRRVGSILSQDIHFWIGKDSSQDEKSCVAIYTTQLDDYLGGSPVQHREVQCHESDTFRGYFKQGIIYKKGGVASGMKHVETNTYDVKRLLHVKGKRNIRATEVEMSWDSFNRGDVFLLDLGKVIIQWNGPESSSRERLKAMLLAKDIRDRERGGRAEIGVIEGDKEAASPELMKVLQDTLGRHSIIKPAVPDEIIDQQQKSNITLYHVSDSAGQLAVTEVATRPLVQGLLNHDDCYILDQSGTKIYVWKGRGATKVEKQMAMSKALNFIKMKGYPSSTNVETVSDGAESAMFKQLFQKWSVKEQTVGLGKTFSIGKIVNVFQDKFDVTLLHTKPEVAAQERMVDDGNGNVEVSPVTHIPGQAAALALLAALLYRRGT*