Sequence detailsbmy_03958 (Coding sequence)

Part of scaffold_119 (SequenceType object (1))

For more information consult the page for scaffold_119 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

AGAENSTTRG00000013240 (Bottlenosed dolphin)

Gene Details

aspartylglucosaminidase

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000012559, Bottlenosed dolphin)

Protein Percentage 76.36%
cDNA percentage 77.74%
Ka/Ks Ratio 0.38904 (Ka = 0.0531, Ks = 0.1365)

AGAENSBTAG00000017085 (Cow)

Gene Details

N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000022716, Cow)

Protein Percentage 83.91%
cDNA percentage 85.54%
Ka/Ks Ratio 0.25786 (Ka = 0.0969, Ks = 0.3759)

AGA (Minke Whale)

Gene Details

aspartylglucosaminidase

External Links

Gene match (Identifier: BACU013320, Minke Whale)

Protein Percentage 86.58%
cDNA percentage 90.16%
Ka/Ks Ratio 0.5234 (Ka = 0.0871, Ks = 0.1665)

Additional orthologs identified in other species via the OPTIC pipeline.

AGA (Human)   Aga (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1218 bp    Location:541329..554164   Strand:+
Raw sequence 
>bmy_03958
GGCGGAGTGGGCGGGGCGGGAAGGTGGGCGGGGCGCCGGGACCGCGAGTTCCGGGATCCCCAGCCGCGGAGGTACCGGGGTCCGGGCGGCCGTGGGCCTCGTCGGGCTTATTCTAGGCGGCGGCGGGCGGCCATGGCGCGGAAGCTGAGCCTCCGGCTGCTGCTGTCGCTGCTGCTGCTCTGCCGGGCCCCGGTGTGCAGCTCCGGCCCTCTGCCCCTGGTCCTCAACACTTGGCCTTTCAGGAATGCATCCGTAGCAGCGTGGAGGACGTTGGCGGCTGGAGGGTCTGCGCTGGACGCGGTTGAGAGCGGCTGTGCGGCGTGCGAGCGGGAGCGCTGTGACGGCACCGTGGGCTTCGGCGGCAGCCCCGACGAGTCCGGAGAGACCACCCTGGACGCCATGATCATGGACGGTACTACCATGAACGTAGGAGCAGTGGGGGATCTTAGACGAATTAAAAACGCCATCGGTGTAGCACGAAAAGTACTGGAACACACGACACACACGTTGTTAGCAGGAGAGTCAGCCACCAAGTTTGCCGAAAGTATGGGGTTTATCAACGAGGATTTATCTACCGATGCTTCTTGTGCCCTTCATTCAGATTGGCTTGCCTGGAATTGCCAGCCAAATTACTGGAGGAATGTTATACCAGATGCTTCAAAATACTGTGGACCCTACAAACCACCTAGTATCTTAAAGCGAGATGGTTCTACCTACAAAGAAACAGGAGATAGTTACGGTCATGATACTATTGGCATGGTTGTCATCCATAAGATGGGAAATATTGCTGCTGTAGTAGAAAAGCATGGAAGGTTTATTACAAGGAAAAACTTGAGTAAAATGTTGGCACCTGACCTAGACAGCAGGAATAGATTTCGAATAGGAGACTCGCCAATACCTGGATCTGGGGCCTATGCCGACGACACTGCCGGGGCTGCAGCAGCCACTGGGGACGGCGACATACTGATGCGCTTCCTCCCAAGCTACCAAGCTGTAGAATATATGAGAAGAGGAAAAGATCCAACCACAGCATGCCAGAAAGTGATTTTAAGAATCCAGAAGTATTTTCCCAACTTCTTTGGGGCTGTGGTATGTGCTAACGTGACTGGAAGTTACGGTGCTGCCTGCAATAAACTTTCAACATTTACTCAGTTTCATTTCATGGTTTACAATCCTCTAAAAAGTGAGCCAACTGAGGAAAAAGTAGACTGCATCTAA

Related Sequences

bmy_03958T0 SequenceType object (3)

Length: 406 aa      View alignments
>bmy_03958T0
GGVGGAGRWAGRRDREFRDPQPRRYRGPGGRGPRRAYSRRRRAAMARKLSLRLLLSLLLLCRAPVCSSGPLPLVLNTWPFRNASVAAWRTLAAGGSALDAVESGCAACERERCDGTVGFGGSPDESGETTLDAMIMDGTTMNVGAVGDLRRIKNAIGVARKVLEHTTHTLLAGESATKFAESMGFINEDLSTDASCALHSDWLAWNCQPNYWRNVIPDASKYCGPYKPPSILKRDGSTYKETGDSYGHDTIGMVVIHKMGNIAAVVEKHGRFITRKNLSKMLAPDLDSRNRFRIGDSPIPGSGAYADDTAGAAAATGDGDILMRFLPSYQAVEYMRRGKDPTTACQKVILRIQKYFPNFFGAVVCANVTGSYGAACNKLSTFTQFHFMVYNPLKSEPTEEKVDCI*