Part of scaffold_119 (Scaffold)

For more information consult the page for scaffold_119 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NEIL3 ENSTTRG00000013224 (Bottlenosed dolphin)

Gene Details

nei endonuclease VIII-like 3 (E. coli)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012548, Bottlenosed dolphin)

Protein Percentage 87.87%
cDNA percentage 91.62%
Ka/Ks Ratio 0.51731 (Ka = 0.0733, Ks = 0.1416)

BT.37835 ENSBTAG00000005825 (Cow)

Gene Details

endonuclease 8-like 3

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000007661, Cow)

Protein Percentage 78.68%
cDNA percentage 86.71%
Ka/Ks Ratio 0.51705 (Ka = 0.1217, Ks = 0.2354)

NEIL3  (Minke Whale)

Gene Details

nei endonuclease VIII-like 3 (E. coli)

External Links

Gene match (Identifier: BACU013319, Minke Whale)

Protein Percentage 54.89%
cDNA percentage 65.39%
Ka/Ks Ratio 0.65036 (Ka = 0.4392, Ks = 0.6753)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1737 bp    Location:690472..610411   Strand:-
>bmy_03959
ATGCCCATCAGCATCACGGGTTCCTTGCTTTCCTCCTGCGGCCTGACGGGCTGCGACTTTGCCATCGTCCTCCAGGGGGCGCTGCGGGACCGTGAGCCCGCGCTGCTTATTAAGAGCGGAGTTTCTGCCAATCTCCTACCAGCTCAGGCTGCTGCACTGAATAATAATAAAGACTCCAGCCAGAATTTCTTGAGACTGTTTAATGGACACATTTACAGTGGCGTGGAAACTTTGGGGAAGGAGCTCTTTATGTACTTTGGGCCAAAAGCTTTACGGATTCATTTTGGAATGAAAGGCTCCCTCGTGATTAATCCAGTTAAGTCTAAAAATAAAAATGGACTTTCTCCTGTTTTTGAAGTACAGCTCACCAAAGATCTGATTTGTTTCTTTGACTCATCAGTAGAAATCAGAAACTCAGCAGAAAGCCAACAGAGAATAAGAATGATGGAAGAATTAGATGTATGTTCACCTAACTTTAGTTTCTCAAGAGCAGAAAGTGAAGTGAAAAAGCAGAGAGGACGRATGCTATGTGACGTGTTAATGGATCAGAAAGTGTTGCCCGGGGTGGGAAACATCATCAAAAATGAAGCTCTCTTTGACAGTGGTCTCCATCCTGCTGTTAAATGCCACAAAGCAGGATCTGCTGTCTCTAACCACTATAAGGTTTACAAGCGTCCTAATTGTGGTCAGTGCTGCTGCAAAATAACTGTGTGTCGCTTAGGGGAGAATAAGAGAATGACATATTTCTGTCCTCACTGTCAGAAGGAAAATCCTCAACATGCTGACATATGCAGGCTGCCAGCTAGAAATACTACAGTCAGTTGGCCATCTAGCAGAGGGGGTCATCTTACAGACTCGGTGGCCCGGAAGTCTGAAGAGCAATGGACATGTGAGGTCTGTACGCTAATAAATCAGCCGTCTTCTAGAGCATGTGATGCTTGCCTGACTTCAAGGCCTGCGGATTTGGTACCCAAGAATGAAGAAAATCCTATTGCCTTTAACAGTTTAGTGAAATACCCTTGTAATAGCTTTGGAAAGCCAAGGACGGAAGTGAAGATCAACAGGAAAACTGCATTTGGAACTGCAACCCTTGTTTTGACGGATTTCAGCAATAAATCCAGTGCTTTGGAAARAGAAGAAAGCCAAAACCAGATACTAGATGGGGAATTTCTAAACCCTCCTACTAACGTTTGTTTTAGTGATACAGTGCACCCCTCCAAGGAGAGAACAAACTATAGAACTCAACTATCTAACAAAGTAAACATATCATCTGTGGTCTGCTCTCCGTCTAAATTATTTAGTCCAGCATATAAAAAATTTAAAACAACCCACTACKCATCACGGGATCTCAAAAGTGGCAACCCTGGATTTTTTAACAGGGAACTTCAAAGTAACACGACAGATGGTCCTCGTTCATTAAATGCCCGCAGTCCCCGCTGCAGTAAACATGACCGCCCCTGCGTTCTCCGAGTGGTGAGGAAGGATGGAGAAAACAAGGGCAGGCACTTTTATGCTTGTCCTCTACCGAAAGAAGCACAATGTGGATTTTTCGAATGGGCAGATTTGTCCTTCCCATTCTGCAGCCATGGCAAACGCTCCATCATGAGAACAGTGTTGAAGATTGGACCTAATAATGGAAAGAATTTTTTTGTGTGCCCTCTTGGGAAGGAAAAACAGTGCAATTTTTTCCAATGGGCAGAAAATGGGCCAGGAATAAACATTATTCCAGGATGCTAA

Related Sequences

bmy_03959T0 Protein

Length: 579 aa      View alignments
>bmy_03959T0
MPISITGSLLSSCGLTGCDFAIVLQGALRDREPALLIKSGVSANLLPAQAAALNNNKDSSQNFLRLFNGHIYSGVETLGKELFMYFGPKALRIHFGMKGSLVINPVKSKNKNGLSPVFEVQLTKDLICFFDSSVEIRNSAESQQRIRMMEELDVCSPNFSFSRAESEVKKQRGRMLCDVLMDQKVLPGVGNIIKNEALFDSGLHPAVKCHKAGSAVSNHYKVYKRPNCGQCCCKITVCRLGENKRMTYFCPHCQKENPQHADICRLPARNTTVSWPSSRGGHLTDSVARKSEEQWTCEVCTLINQPSSRACDACLTSRPADLVPKNEENPIAFNSLVKYPCNSFGKPRTEVKINRKTAFGTATLVLTDFSNKSSALEXEESQNQILDGEFLNPPTNVCFSDTVHPSKERTNYRTQLSNKVNISSVVCSPSKLFSPAYKKFKTTHYXSRDLKSGNPGFFNRELQSNTTDGPRSLNARSPRCSKHDRPCVLRVVRKDGENKGRHFYACPLPKEAQCGFFEWADLSFPFCSHGKRSIMRTVLKIGPNNGKNFFVCPLGKEKQCNFFQWAENGPGINIIPGC*