Part of scaffold_119 (SequenceType object (1))

For more information consult the page for scaffold_119 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NEIL3ENSTTRG00000013224 (Bottlenosed dolphin)

Gene Details

nei endonuclease VIII-like 3 (E. coli)

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000012548, Bottlenosed dolphin)

Protein Percentage 87.87%
cDNA percentage 91.62%
Ka/Ks Ratio 0.51731 (Ka = 0.0733, Ks = 0.1416)

BT.37835ENSBTAG00000005825 (Cow)

Gene Details

endonuclease 8-like 3

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000007661, Cow)

Protein Percentage 78.68%
cDNA percentage 86.71%
Ka/Ks Ratio 0.51705 (Ka = 0.1217, Ks = 0.2354)

NEIL3 (Minke Whale)

Gene Details

nei endonuclease VIII-like 3 (E. coli)

External Links

Gene match (Identifier: BACU013319, Minke Whale)

Protein Percentage 54.89%
cDNA percentage 65.39%
Ka/Ks Ratio 0.65036 (Ka = 0.4392, Ks = 0.6753)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence SequenceType object (2)

Length: 1737 bp    Location:690472..610411   Strand:-
>bmy_03959
ATGCCCATCAGCATCACGGGTTCCTTGCTTTCCTCCTGCGGCCTGACGGGCTGCGACTTTGCCATCGTCCTCCAGGGGGCGCTGCGGGACCGTGAGCCCGCGCTGCTTATTAAGAGCGGAGTTTCTGCCAATCTCCTACCAGCTCAGGCTGCTGCACTGAATAATAATAAAGACTCCAGCCAGAATTTCTTGAGACTGTTTAATGGACACATTTACAGTGGCGTGGAAACTTTGGGGAAGGAGCTCTTTATGTACTTTGGGCCAAAAGCTTTACGGATTCATTTTGGAATGAAAGGCTCCCTCGTGATTAATCCAGTTAAGTCTAAAAATAAAAATGGACTTTCTCCTGTTTTTGAAGTACAGCTCACCAAAGATCTGATTTGTTTCTTTGACTCATCAGTAGAAATCAGAAACTCAGCAGAAAGCCAACAGAGAATAAGAATGATGGAAGAATTAGATGTATGTTCACCTAACTTTAGTTTCTCAAGAGCAGAAAGTGAAGTGAAAAAGCAGAGAGGACGRATGCTATGTGACGTGTTAATGGATCAGAAAGTGTTGCCCGGGGTGGGAAACATCATCAAAAATGAAGCTCTCTTTGACAGTGGTCTCCATCCTGCTGTTAAATGCCACAAAGCAGGATCTGCTGTCTCTAACCACTATAAGGTTTACAAGCGTCCTAATTGTGGTCAGTGCTGCTGCAAAATAACTGTGTGTCGCTTAGGGGAGAATAAGAGAATGACATATTTCTGTCCTCACTGTCAGAAGGAAAATCCTCAACATGCTGACATATGCAGGCTGCCAGCTAGAAATACTACAGTCAGTTGGCCATCTAGCAGAGGGGGTCATCTTACAGACTCGGTGGCCCGGAAGTCTGAAGAGCAATGGACATGTGAGGTCTGTACGCTAATAAATCAGCCGTCTTCTAGAGCATGTGATGCTTGCCTGACTTCAAGGCCTGCGGATTTGGTACCCAAGAATGAAGAAAATCCTATTGCCTTTAACAGTTTAGTGAAATACCCTTGTAATAGCTTTGGAAAGCCAAGGACGGAAGTGAAGATCAACAGGAAAACTGCATTTGGAACTGCAACCCTTGTTTTGACGGATTTCAGCAATAAATCCAGTGCTTTGGAAARAGAAGAAAGCCAAAACCAGATACTAGATGGGGAATTTCTAAACCCTCCTACTAACGTTTGTTTTAGTGATACAGTGCACCCCTCCAAGGAGAGAACAAACTATAGAACTCAACTATCTAACAAAGTAAACATATCATCTGTGGTCTGCTCTCCGTCTAAATTATTTAGTCCAGCATATAAAAAATTTAAAACAACCCACTACKCATCACGGGATCTCAAAAGTGGCAACCCTGGATTTTTTAACAGGGAACTTCAAAGTAACACGACAGATGGTCCTCGTTCATTAAATGCCCGCAGTCCCCGCTGCAGTAAACATGACCGCCCCTGCGTTCTCCGAGTGGTGAGGAAGGATGGAGAAAACAAGGGCAGGCACTTTTATGCTTGTCCTCTACCGAAAGAAGCACAATGTGGATTTTTCGAATGGGCAGATTTGTCCTTCCCATTCTGCAGCCATGGCAAACGCTCCATCATGAGAACAGTGTTGAAGATTGGACCTAATAATGGAAAGAATTTTTTTGTGTGCCCTCTTGGGAAGGAAAAACAGTGCAATTTTTTCCAATGGGCAGAAAATGGGCCAGGAATAAACATTATTCCAGGATGCTAA

Related Sequences

bmy_03959T0 SequenceType object (3)

Length: 579 aa      View alignments
>bmy_03959T0
MPISITGSLLSSCGLTGCDFAIVLQGALRDREPALLIKSGVSANLLPAQAAALNNNKDSSQNFLRLFNGHIYSGVETLGKELFMYFGPKALRIHFGMKGSLVINPVKSKNKNGLSPVFEVQLTKDLICFFDSSVEIRNSAESQQRIRMMEELDVCSPNFSFSRAESEVKKQRGRMLCDVLMDQKVLPGVGNIIKNEALFDSGLHPAVKCHKAGSAVSNHYKVYKRPNCGQCCCKITVCRLGENKRMTYFCPHCQKENPQHADICRLPARNTTVSWPSSRGGHLTDSVARKSEEQWTCEVCTLINQPSSRACDACLTSRPADLVPKNEENPIAFNSLVKYPCNSFGKPRTEVKINRKTAFGTATLVLTDFSNKSSALEXEESQNQILDGEFLNPPTNVCFSDTVHPSKERTNYRTQLSNKVNISSVVCSPSKLFSPAYKKFKTTHYXSRDLKSGNPGFFNRELQSNTTDGPRSLNARSPRCSKHDRPCVLRVVRKDGENKGRHFYACPLPKEAQCGFFEWADLSFPFCSHGKRSIMRTVLKIGPNNGKNFFVCPLGKEKQCNFFQWAENGPGINIIPGC*