Sequence details bmy_03962 (Coding sequence)

Part of scaffold_119 (Scaffold)

For more information consult the page for scaffold_119 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SPCS3 ENSTTRG00000015045 (Bottlenosed dolphin)

Gene Details

signal peptidase complex subunit 3 homolog (S. cerevisiae)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014261, Bottlenosed dolphin)

Protein Percentage 92.44%
cDNA percentage 93.56%
Ka/Ks Ratio 0.32441 (Ka = 0.0498, Ks = 0.1535)

SPCS3 ENSBTAG00000014146 (Cow)

Gene Details

Signal peptidase complex subunit 3

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000018803, Cow)

Protein Percentage 62.96%
cDNA percentage 66.67%
Ka/Ks Ratio 0.21384 (Ka = 0.3238, Ks = 1.5142)

SPCS3  (Minke Whale)

Gene Details

signal peptidase complex subunit 3 homolog (S. cerevisiae)

External Links

Gene match (Identifier: BACU020278, Minke Whale)

Protein Percentage 93.28%
cDNA percentage 94.68%
Ka/Ks Ratio 0.36519 (Ka = 0.0426, Ks = 0.1168)

Additional orthologs identified in other species via the OPTIC pipeline.

SPCS3 (Human)  

Genome Location

Sequence Coding sequence

Length: 408 bp    Location:1414051..1403588   Strand:-
Raw sequence 
>bmy_03962
ATGCTGTTATGTTTGAAAGATGGTGAAACTATTATCTTTATTTCTAGAAAAAATGTAGAAGACTTCACTGGACCTAGAGAAAGAAGTGATCTGGGATTCATTACATTTGATATAACTGCTGATATCCTTTTTAGAAAATATTTCATTGCTCTTTCTCTAGCTCTGAACCAGGTTGTTCTGTGGGACAAGATTGTTCTGAGAGGTGATAATCCAAAGCTGCTGTTGAAAGATATGAAAACAAAGTATTTTTTCTTTGACGATGGAAATGGTCTCAAGGGAAACAGGAATGTCACTTTAACCCTATCTTGGAACGTTGTACCAAATGCTGGAATTCTACCTCTTGTGACAGGATCAGGACATGTATCTGTCCCATTTCCAGATACATATGAAATAACGAAGAGTTATTAA

Related Sequences

bmy_03962T0 Protein

Length: 136 aa      View alignments
>bmy_03962T0
MLLCLKDGETIIFISRKNVEDFTGPRERSDLGFITFDITADILFRKYFIALSLALNQVVLWDKIVLRGDNPKLLLKDMKTKYFFFDDGNGLKGNRNVTLTLSWNVVPNAGILPLVTGSGHVSVPFPDTYEITKSY*