Part of scaffold_119 (Scaffold)

For more information consult the page for scaffold_119 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SPATA4 ENSTTRG00000015042 (Bottlenosed dolphin)

Gene Details

spermatogenesis associated 4

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014259, Bottlenosed dolphin)

Protein Percentage 94.76%
cDNA percentage 97.09%
Ka/Ks Ratio 0.61138 (Ka = 0.0224, Ks = 0.0366)

SPATA4 ENSBTAG00000014141 (Cow)

Gene Details

spermatogenesis-associated protein 4

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000046266, Cow)

Protein Percentage 83.74%
cDNA percentage 88.93%
Ka/Ks Ratio 0.54331 (Ka = 0.0944, Ks = 0.1737)

SPATA4  (Minke Whale)

Gene Details

spermatogenesis associated 4

External Links

Gene match (Identifier: BACU013313, Minke Whale)

Protein Percentage 95.85%
cDNA percentage 97.74%
Ka/Ks Ratio 0.61472 (Ka = 0.0165, Ks = 0.0268)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 873 bp    Location:1512128..1517193   Strand:+
>bmy_03965
ATGGCTGCCGCCGGTCTGGGAGGAGAGCTTTTGACACTGCCGACTGTACCCAAGTCACCGTCACTTGCGCCACGTCCAGCCGCTCCCATGCGAGGGAGGCCTAAGAAGTGTCTGGTCTATCCGCATCCCCCGAAGAGCTCCCGCGTGTCTCCGTCGGTTCTGCGCTGGCTCCAGGGCCTGGATCTCAGCTTCTTCCCCAGAAACATCAGCAGGGATTTTTCAAATGGCTTCCTGATAGCAGAAATATTCACTSTACATTACCCACGGGACCTTAAATTGTCATCCTTTAAAAATGGAACTTCTTTAAAAGTCAAGTTGGATAACTGGGCACAGTTGGAAAAGTTCCTGGCRAGAAAAAAACTTAGATTACCTAAAGAACTAATCCACGGAACAATTCATTGTAAAGCCGGAGTACCTGAAATACTGATACAGGAGGTGTACACCTTGTTAACACATCGAGAAATTAAAAGTATCCAGGATGACCTTGTGAATTTCACAGACTACAGTTACCAGATGCAGTTGCCCCTGGTCCCCAGATCGACAGCTTCAAAGTCTATTAAAGATAACATTAGGTTATCAGAATTAATAGGCAATCCGAACAAGCTCAACAATGAACGTAAAGTAGAGTTCCTCTTCCTTTTACAAATGTTGCAAAGAAAATTGAGCAGAAAACTGAATCCAAAATGGTTTGAGGTCAAACCAACAGTGGGAGAATCGACTTTCAGTCATGGTCCCGCCCAAGCCTCTGGGTGCAAATGTAATGGTGGCAATCYACTTAAAGAAATTCACGTGAAGCAAGCTGGAAAACATTCTTTTGACTCTATGAAACCTATCAGAAACATGGAAAAGGAACCCAGAAGAGCACCTGTCTAA

Related Sequences

bmy_03965T0 Protein

Length: 291 aa      View alignments
>bmy_03965T0
MAAAGLGGELLTLPTVPKSPSLAPRPAAPMRGRPKKCLVYPHPPKSSRVSPSVLRWLQGLDLSFFPRNISRDFSNGFLIAEIFTXHYPRDLKLSSFKNGTSLKVKLDNWAQLEKFLARKKLRLPKELIHGTIHCKAGVPEILIQEVYTLLTHREIKSIQDDLVNFTDYSYQMQLPLVPRSTASKSIKDNIRLSELIGNPNKLNNERKVEFLFLLQMLQRKLSRKLNPKWFEVKPTVGESTFSHGPAQASGCKCNGGNXLKEIHVKQAGKHSFDSMKPIRNMEKEPRRAPV*