Sequence detailsbmy_03975 (Coding sequence)

Part of scaffold_121 (SequenceType object (1))

For more information consult the page for scaffold_121 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CARKDENSTTRG00000010887 (Bottlenosed dolphin)

Gene Details

carbohydrate kinase domain containing

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000010330, Bottlenosed dolphin)

Protein Percentage 81.92%
cDNA percentage 86.16%
Ka/Ks Ratio 0.61759 (Ka = 0.1376, Ks = 0.2228)

CARKDENSBTAG00000011466 (Cow)

Gene Details

ATP-dependent (S)-NAD(P)H-hydrate dehydratase

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000015238, Cow)

Protein Percentage 82.37%
cDNA percentage 84.5%
Ka/Ks Ratio 0.18313 (Ka = 0.1044, Ks = 0.57)

CARKD (Minke Whale)

Gene Details

carbohydrate kinase domain containing

External Links

Gene match (Identifier: BACU017413, Minke Whale)

Protein Percentage 76.45%
cDNA percentage 80.15%
Ka/Ks Ratio 0.64585 (Ka = 0.2131, Ks = 0.3299)

Additional orthologs identified in other species via the OPTIC pipeline.

CARKD (Human)   Carkd (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1086 bp    Location:480539..458920   Strand:-
Raw sequence 
>bmy_03975
ATGGCCACCCGGGCGGGGGCCGGGGCTGCGGTTGCCGGCGCCGCCGTTGTCGCGGTGCTCTCGGCCGCGCTCGTGCTCTACGGGCCGCCACTGGACGCAGTTTTAAATCGAGCATTTCCGCTGCATACAGCACGCTCAGTAACGGACATGGAGGCTGCTTTGCAGCTGGTGAGGAACGTGGTGCCTCCTCTGGCCGCCTGGAAGCACAAAGGGCAAGCTGGGAGGATAGGCGTGGTGGGAGGCTGCCCAGAGTACACTGGAGCCCCCTATTTTGCAGCAATCTCAGCTCTCAAAGTGGGCGCGGACTTGTCCCACGTGTTCTCCACCCAGGATGCTGCGCCTGTTATCAAGTCGTACAGCCCGGAGCTGATCGTTCACCCAGTTCTTGACAGCCCCAGTGCCGTCCAGGATGTGGAAAAGTGGTTGCCCCGACTGCACGCCCTGGTCGTAGGGCCTGGCTTAGGCAGAGACGACGCTCTTCTTGAAAACGTCAAGGGCATTTTAGAAGCGTCCAAGGCCAGGGGCATCCCCATCGTCATCGACGCGGACGGGCTGTGGCTGGTCGCTCAGCAGCCGGCCCTCATCCAAGGCTACCAGAAGGCGGTTCTCACCCCCAACCACATGGAGTTCAGCAGACTCGCCGAGGCCGTGCTGGGAGACGCCCTGGATGGCAGGGACCGCTGCAGAGCTGTGCTGAGTCTCAGCCGGGCCCTGGGCAACGTCACCGTGGTCCAGAAGGGGGAGCAGGACGTGATCTCTGATGGCGAGCAGGTGCTCACGTGCAGCCAGGAGGGCAGCGGCCGCAGGTGTGGCGGGCAGGGGGACCTCCTGTCGGGCTCCCTGGGCATCCTGGCGCACTGGGCCCTCCTGGCCGGCCCCGAGAAGACCAACGGGTCCGGCCCGCTCCTCGTGGCTGCCTTCGGTGCCTGCGCGCTCACCCGGCAGTGCGCCCGCCAAGCCTTCCAGAAGCACGGCCGCGCCACCACCACCACGGACATGATCACGGAGCTCGGGCCCGCGTTCAGCAGACTCTTCGAAACCTCAGCTGACGGAGGGGTGGCCCCGACGGGGGGGCTGCGCTTGTGA

Related Sequences

bmy_03975T0 SequenceType object (3)

Length: 362 aa      View alignments
>bmy_03975T0
MATRAGAGAAVAGAAVVAVLSAALVLYGPPLDAVLNRAFPLHTARSVTDMEAALQLVRNVVPPLAAWKHKGQAGRIGVVGGCPEYTGAPYFAAISALKVGADLSHVFSTQDAAPVIKSYSPELIVHPVLDSPSAVQDVEKWLPRLHALVVGPGLGRDDALLENVKGILEASKARGIPIVIDADGLWLVAQQPALIQGYQKAVLTPNHMEFSRLAEAVLGDALDGRDRCRAVLSLSRALGNVTVVQKGEQDVISDGEQVLTCSQEGSGRRCGGQGDLLSGSLGILAHWALLAGPEKTNGSGPLLVAAFGACALTRQCARQAFQKHGRATTTTDMITELGPAFSRLFETSADGGVAPTGGLRL*