Part of scaffold_122 (Scaffold)

For more information consult the page for scaffold_122 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TYMS ENSTTRG00000016669 (Bottlenosed dolphin)

Gene Details

thymidylate synthetase

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015804, Bottlenosed dolphin)

Protein Percentage 90.48%
cDNA percentage 92.49%
Ka/Ks Ratio 0.55533 (Ka = 0.0678, Ks = 0.122)

TYMS ENSBTAG00000007003 (Cow)

Gene Details

thymidylate synthase

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000009214, Cow)

Protein Percentage 85.71%
cDNA percentage 86.77%
Ka/Ks Ratio 0.26197 (Ka = 0.0919, Ks = 0.3508)

TYMS  (Minke Whale)

Gene Details

thymidylate synthetase

External Links

Gene match (Identifier: BACU000699, Minke Whale)

Protein Percentage 87.97%
cDNA percentage 91.07%
Ka/Ks Ratio 0.70235 (Ka = 0.088, Ks = 0.1253)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 960 bp    Location:684432..672792   Strand:-
>bmy_03987
ATGCCCGCCGCCGGCTCCGAGCTGCCGCGCTTGACGTCGCCGCCCGCCGCGCAAGAGCAGGGCGCCGAGTCGCGGCCGCCGCCGCCGCACGGGGAGCTGCAGTACTTGGGGCAGATCGAGCACATCCTCCGCTGCGGCTTTCGGAAGGATGACCGCACGGGCACCGGCACCCTGTCGGTGTTCGGCATGCAGGCGCGCTACAGCCTGAGAGCACAGGCCCACAGCGGGGAGGCTTTTGGGGGATCGACCCTGATGGCACAGAATTCACTGGATACTGCTCTCTCCCATCTCCTCCAGGGATCCACAAACGCTAAGGAGCTGTCTTCCAAGGGAGTGAAAATCTGGGATGCCAATGGGTCCCGAGACTTCTTGGACAGCCTGGGATTCTCCACCAGAGCAGAAGGGGATTTAGGCCCAGTTTATGGCTTTCAGTGGAGGCATTTTGGGGCCGAATACAAAAATATGGGTTCAGATTATTCAGATCAAGGAGTAGATCAACTGCAAAAAGTGATTGACACAATCAAAACCAACCCTGACGACAGAAGAATCATCCTGTGTGCTTGGAATCCAAAAGATCTCCCTCTCATGGCCCTACCCCCGTGCCATGCCCTTTGCCAGTTCTACGTGGTGAACGGTGAGCTGTCCTGCCAGCTGTACCAGAGGTCAGGAGACATGGGCCTGGGTGTGCCCTTCAACATCGCCAGCTACGCCCTGCTCACCTACATGATCGCACACATCACGGGCCTGAAGCCAGGTGACTTTGTACACACTTTGGGAGATGCACACATTTACCTGAATCACATTGAGCCGCTGAAAATTCAGCTTCAGCGAGAACCAAGGCCTTTCCCCAAGCTCAGAATCCTTCGAAAAGTTGAGAAAATTGATGACTTCAAGGCTGAAGACTTTCAGATTGAAGGCTACAATCCTCACCCGACTATTAAAATGGAAATGGCTGTTTAG

Related Sequences

bmy_03987T0 Protein

Length: 320 aa      View alignments
>bmy_03987T0
MPAAGSELPRLTSPPAAQEQGAESRPPPPHGELQYLGQIEHILRCGFRKDDRTGTGTLSVFGMQARYSLRAQAHSGEAFGGSTLMAQNSLDTALSHLLQGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTRAEGDLGPVYGFQWRHFGAEYKNMGSDYSDQGVDQLQKVIDTIKTNPDDRRIILCAWNPKDLPLMALPPCHALCQFYVVNGELSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFVHTLGDAHIYLNHIEPLKIQLQREPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV*