Part of scaffold_123 (Scaffold)

For more information consult the page for scaffold_123 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ARNTL ENSTTRG00000013925 (Bottlenosed dolphin)

Gene Details

aryl hydrocarbon receptor nuclear translocator-like

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013209, Bottlenosed dolphin)

Protein Percentage 95.48%
cDNA percentage 96.24%
Ka/Ks Ratio 0.5501 (Ka = 0.0329, Ks = 0.0599)

ARNTL ENSBTAG00000013029 (Cow)

Gene Details

aryl hydrocarbon receptor nuclear translocator-like protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000017323, Cow)

Protein Percentage 94.52%
cDNA percentage 93.45%
Ka/Ks Ratio 0.21028 (Ka = 0.0372, Ks = 0.177)

ARNTL  (Minke Whale)

Gene Details

aryl hydrocarbon receptor nuclear translocator-like

External Links

Gene match (Identifier: BACU005645, Minke Whale)

Protein Percentage 95.48%
cDNA percentage 96.34%
Ka/Ks Ratio 0.61053 (Ka = 0.0331, Ks = 0.0542)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1866 bp    Location:354299..318232   Strand:-
>bmy_04014
ATGGCCGAACAGAGAATGGACATTTCTTCAACTATCAGCGACTTCATGTCCCCAGGCGCCACCGACCTCCTCTCCAGCCCCCTGGGCACCGGTGGCATGGATTGCAACCGGAAACGCAAGGGCAGCTCCACGGACTACCAAGAAAGCATGGACACAGACAAAGATGACCCTCATGGAAGGTTAGAATACACAGAGCACCAAGGAAGGATCAAAAATGCAAGGGAAGCTCACAGCCAGATTGAAAAGAGGCGTCGGGATAAAATGAACAGTTTTATTGATGAACTGGCTTCTTTGGTACCAACGTGCAACGCGATGTCCAGGAAATTAGATAAACTTACTGTGCTGAGGATGGCTGTTCAGCACATGAAAACATTACGAGGTGCCACCAATCCATACACAGAAGCAAACTACAAACCGACTTTTCTATCAGATGATGAATTGAAACACCTTATTCTCAGGGCAGCAGATGGATTTTTGTTTGTCGTAGGATGTGACCGAGGGAAGATCCTCTTTGTGTCAGAGTCTGTCTTCAAGATCCTCAACTACAGCCAGAATGATCTGATTGGTCAGAGTTTATTTGACTACCTGCATCCTAAAGATATCGCCAAAGTCAAGGAGCAGCTCTCCTCCTCTGACACTGCACCCCGGGAGCGGCTCATAGATGCAAAAACTGGACTTCCAGTTAAAACAGATATAACCCCTGGGCCATCTCGATTATGTTCTGGAGCACGGCGTTCTTTCTTCTGTAGGATGAAGTGTAACAGGCCTTCCGTAAAGGTTGAAGACAAGGATTTCCCCTCCACCTGCTCAAAGAAAAAAGCAGATCGAAAAAGCTTCTGCACAATCCACAGCACAGGCTATTTGAAAAGTTGGCCGCCCACAAAAATGGGGCTGGACGAAGACAACGAACCAGACAACGAGGGGTGTAATCTCAGCTGCCTTGTCGCCATCGGACGACTGCACTCTCACATGGTTCCACAACCGGCGAACGGGGAAATCAGGGTGAAATCTATGGAATATGTCTCTCGGCATGCAATAGATGGGAAGTTTGTTTTTGTAGACCAGAGGGCAACAGCTATTTTGGCATATTTACCACAAGAACTTCTAGGCACCTCATGTTATGAATATTTTCACCAAGATGACATAGGACATCTCGCAGAATGTCATAGGCAAGTTTTACAGACAAGAGAAAAGATTACAACTAATTGCTATAAGTTTAAAATCAAAGATGGTTCTTTCATCACACTACGGAGTCGGTGGTTCAGTTTCATGAACCCTTGGACCAAGGAAGTAGAATACATTGTCTCCACCAACACCGTTGTTTTAGCCAACGTCCTGGAAGGCGGGGACCCGAGCTTCCCTCAGCCCACAGCATCCCCCCGCAGCATGGACGGCACGCTGCCCTCTGGAGAAGCGGCCTCCTGGGCGAAGCCACCTGGAGTCCCACAGGCACCTATAACTCAGCACATCCAGATCGGTTCTCTGCACACACCCTCACCCCCAGTCTGGATAAGAGGGTCATCGCCTTCCAGCTGTGGCTCCAGCCCATTGAACATCACAAGTACACCTCCCCCTGATGCCTCTTCTCCAGGAGGCAAGAAGATTTTAAATGGAGGGACTCCAGACATTCCTTCCAGTGGCCTACTACCAGGGCAGGCTCAGGAGAACCCAGGTTATCCATATTCTGATAGCTCTTCTATTCTTGGTGAGAACCCTCACATAGGCATAGATATGATAGACAACGATCAAGGCTCAAGCAGTCCCAGTAATGATGAAGCAGCAATGGCTGTCATAATGAGCCTCTTGGAAGCAGATGCTGGGCTCGGTGGTCCTGTTGACTTTAGCGACTTGCCATGGCCGCTGTAA

Related Sequences

bmy_04014T0 Protein

Length: 622 aa      View alignments
>bmy_04014T0
MAEQRMDISSTISDFMSPGATDLLSSPLGTGGMDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHMVPQPANGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGDPSFPQPTASPRSMDGTLPSGEAASWAKPPGVPQAPITQHIQIGSLHTPSPPVWIRGSSPSSCGSSPLNITSTPPPDASSPGGKKILNGGTPDIPSSGLLPGQAQENPGYPYSDSSSILGENPHIGIDMIDNDQGSSSPSNDEAAMAVIMSLLEADAGLGGPVDFSDLPWPL*