Part of scaffold_123 (Scaffold)

For more information consult the page for scaffold_123 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PARVA ENSTTRG00000000450 (Bottlenosed dolphin)

Gene Details

parvin, alpha

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000423, Bottlenosed dolphin)

Protein Percentage 86.51%
cDNA percentage 86.39%
Ka/Ks Ratio 0.3299 (Ka = 0.0157, Ks = 0.0476)

BT.104140 ENSBTAG00000000700 (Cow)

Gene Details

alpha-parvin

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000000935, Cow)

Protein Percentage 99.62%
cDNA percentage 96.73%
Ka/Ks Ratio 0.01772 (Ka = 0.0019, Ks = 0.1059)

PARVA  (Minke Whale)

Gene Details

parvin, alpha

External Links

Gene match (Identifier: BACU005648, Minke Whale)

Protein Percentage 90.16%
cDNA percentage 91.99%
Ka/Ks Ratio 0.9083 (Ka = 0.0827, Ks = 0.091)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 873 bp    Location:1242567..1165474   Strand:-
>bmy_04017
ATGGTGGATCCCAACTCACGCAGCGACCCCAAACTTCAAGAACTGATCAAGGTATTAATTGACTGGATTAATGATGTTTTGGTTGGAGAAAGAATCATTGTGAAAGACCTGGCTGAAGATTTATATGATGGCCAAGTCCTGCAGAAGCTTTTTGAGAAACTTGAGAGTGAGAAGCTGAACGTCGCTGAGGTCACCCAGTCAGAGATTGCCCAGAAGCAAAAGCTGCAGACTGTCYTGGAGAAGATCAATGAAACCCTGAAACTTCCTCCCAGGAGCATCAAGTGGAATGTAGACACTGTTCATGCCAAGAGCCTGGTAGCCATCTTGCATCTGCTGGTTGCTCTGTCCCAGTATTTCCGGGCACCAATCCGACTCCCAGATCATGTTTCCATCCAAGTGGTTGTGGTCCAGAAACGAGAAGGAATCCTCCAGTCTCGGCAAATCCAAGAGGAAATAACTGGTAACACAGAGGCTCTTTCTGGAAGGCATGAACGTGATGCCTTTGACACCTTGTTTGACCACGCACCAGACAAGCTGAACGTGGTGAAAAAGACGCTCATTACTTTCGTGAACAAGCACCTGAATAAATTGAACCTGGAGGTCACGGAACTGGAAACCCAGTTTGCAGATGGGGTGTACCTGGTGCTGCTCATGGGGCTCCTGGAGGGCTACTTCGTGCCCCTGCACAGCTTCTTCCTGACCCCGGACAGCTTTGAACAGAAGGTCTTGAACGTCTCCTTTGCCTTTGAGCTCATGCAAGACGGAGGATTGGAAAAGCCAAAACCACGGCCAGAAGACATCGTCAACTGTGACCTGAAATCCACACTGCGAGTGTTGTACAACCTCTTCACCAAGTACCGGAACGTGGAGTGA

Related Sequences

bmy_04017T0 Protein

Length: 291 aa      View alignments
>bmy_04017T0
MVDPNSRSDPKLQELIKVLIDWINDVLVGERIIVKDLAEDLYDGQVLQKLFEKLESEKLNVAEVTQSEIAQKQKLQTVLEKINETLKLPPRSIKWNVDTVHAKSLVAILHLLVALSQYFRAPIRLPDHVSIQVVVVQKREGILQSRQIQEEITGNTEALSGRHERDAFDTLFDHAPDKLNVVKKTLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEGYFVPLHSFFLTPDSFEQKVLNVSFAFELMQDGGLEKPKPRPEDIVNCDLKSTLRVLYNLFTKYRNVE*