Part of scaffold_128 (Scaffold)

For more information consult the page for scaffold_128 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

IRG1 ENSTTRG00000001418 (Bottlenosed dolphin)

Gene Details

immunoresponsive 1 homolog (mouse)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001335, Bottlenosed dolphin)

Protein Percentage 93.1%
cDNA percentage 94.14%
Ka/Ks Ratio 0.48272 (Ka = 0.0483, Ks = 0.1001)

IRG1 ENSBTAG00000008259 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000010869, Cow)

Protein Percentage 84.29%
cDNA percentage 87.91%
Ka/Ks Ratio 0.44864 (Ka = 0.1024, Ks = 0.2283)

IRG1  (Minke Whale)

Gene Details

immunoresponsive 1 homolog (mouse)

External Links

Gene match (Identifier: BACU011830, Minke Whale)

Protein Percentage 94.65%
cDNA percentage 95.32%
Ka/Ks Ratio 0.56514 (Ka = 0.0407, Ks = 0.0721)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1362 bp    Location:260123..268060   Strand:+
>bmy_04026
ATGATGCTCAAGTCTGTCACAGAAAGCTTGGCCAAACTGATCCACGGCTTGAAAGTGGGACACCTGACAGATCGTGTTATCCAGAGGAGCAAGAGGATGATTCTGGATACTCTGGGTGTTGGGTTCCTGGGAACCAGTACAGAAGTGTTTCACAAAGCCAGGGAATACAGTAAAGTAAGAAGCTCAATGTCTACTTTGGAGCTAAAACCAAGTGTGCACATCTATAGTTCCAATGTATCCAGCACTATTCACTCAATGGATTTTGATGACACGTGGTACCCTGCCACCCACCCTTCTGGAGCTGTCCTTCCTGTCCTCATGGCTTTATCGGAAGCTCTGCCTCCAAGTCCAAAGTGTTCTGGCCTTGACCTGCTGCTGGCTTTCAACGTTGGTATTGAAGTGCAAGGCCGATTAATGCATTTCTCCAAGGAAGCCAAGGACATACCAAAGAGTGCTGCTGCGGCATCTAAGTTTTTGGGGCTCAGCATGACAGAGTGCCAAGAGGCCCTGGCTATTGCTGTTTCTCATGCTGGAGCACCCATGGCGAATGCCGCCACTCAGACCAAGCCTCTTCACATCGGCAATGCTGCCAGGCATGGGCTAGAAGCTGCTTTTCTGGCAATGCTGGGTCTCCAGGGAAACAAACAGGTCTTGGATATGGAGTCAGGGTTTGGGGCCTTCTATGCCAACTATGCCCCCAAAATCCTTCCAGACGTAGATTCACACACTTGGCTGCTGGACCAGCAGGATGTGGCCTTCAAGCTTTTCCCTGCCCATTTGGCCACGCACTGGGTGGCAGACGCAGCTGCATCTGTGAGAAAACAGCTTGTAAGAGACAGAGCCCTGCTTCCCACTGACCACACGGAGAGAATTGTGCTTAGAATTCCAGATGTCCAGTATGTGAACAGGCCCTTCCCAGACTCGGAGCATGAGGCCCGCCACTCCTTCCAGTATGTGGCCTGCGCCATGCTGCTGGATGGTGCCATCACTGTCCCATCATTCCACAAACACCAGGTCAACAGGCCATGGGTAAGAGAGTTGCTTGGTAAGGTAGAGCTGGAGCACCCTCGGGACAACCTACCAAATTTCAACACACTCTACTGCGAGATAAGTGTTGCCCTCAAGGATGGAGCCATCTTCACAGAGCGCTCTGATACCTTCTACGGTCACTGGAGGAAGCCTCTGAGCCAGAAAGACCTACAGGAAAAGTTCAGAGCCAATGCCTGCAGGATGCTGTCCTGCCACACTGTAGAAAGGCTTATAGAGATAGTAGAAAACCTAGAAGACCTGGAAGACTGCTCTGTGTTAACCACACTTCTGAAAGAACCCTCTCCACCAGAGATAGTTACAAAATCTCTCTAG

Related Sequences

bmy_04026T0 Protein

Length: 454 aa      View alignments
>bmy_04026T0
MMLKSVTESLAKLIHGLKVGHLTDRVIQRSKRMILDTLGVGFLGTSTEVFHKAREYSKVRSSMSTLELKPSVHIYSSNVSSTIHSMDFDDTWYPATHPSGAVLPVLMALSEALPPSPKCSGLDLLLAFNVGIEVQGRLMHFSKEAKDIPKSAAAASKFLGLSMTECQEALAIAVSHAGAPMANAATQTKPLHIGNAARHGLEAAFLAMLGLQGNKQVLDMESGFGAFYANYAPKILPDVDSHTWLLDQQDVAFKLFPAHLATHWVADAAASVRKQLVRDRALLPTDHTERIVLRIPDVQYVNRPFPDSEHEARHSFQYVACAMLLDGAITVPSFHKHQVNRPWVRELLGKVELEHPRDNLPNFNTLYCEISVALKDGAIFTERSDTFYGHWRKPLSQKDLQEKFRANACRMLSCHTVERLIEIVENLEDLEDCSVLTTLLKEPSPPEIVTKSL*