Sequence details bmy_04043 (Coding sequence)

Part of scaffold_124 (Scaffold)

For more information consult the page for scaffold_124 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NR2F1 ENSTTRG00000001519 (Bottlenosed dolphin)

Gene Details

nuclear receptor subfamily 2, group F, member 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001434, Bottlenosed dolphin)

Protein Percentage 100.0%
cDNA percentage 99.5%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0317)

NR2F1 ENSBTAG00000017599 (Cow)

Gene Details

COUP transcription factor 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000023401, Cow)

Protein Percentage 99.15%
cDNA percentage 97.26%
Ka/Ks Ratio 0.01758 (Ka = 0.0034, Ks = 0.1911)

NR2F1  (Minke Whale)

Gene Details

nuclear receptor subfamily 2, group F, member 1

External Links

Gene match (Identifier: BACU017776, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 99.87%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0081)

Additional orthologs identified in other species via the OPTIC pipeline.

NR2F1 (Human)   Nr2f1 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1131 bp    Location:1114265..1133861   Strand:+
Raw sequence 
>bmy_04043
ATGTTTTGGGGCCGGGATGATTCCCAGGGGAGGGAGCGCTTGGCCCGGCCTCAGCTTCAAGGGGACAAGGGCCAGGGCCCGCCCGGCTCGGGCCAGAGCCAGCAGCACATCGAGTGCGTGGTGTGCGGGGACAAGTCGAGCGGCAAGCACTACGGCCAGTTCACCTGCGAGGGCTGCAAAAGTTTCTTCAAGAGGAGCGTCCGCAGGAACTTAACTTACACATGCCGTGCCAACAGGAACTGTCCCATCGACCAGCACCACCGCAACCAGTGCCAATACTGCCGCCTCAAGAAGTGCCTCAAAGTGGGCATGAGGCGGGAAGCGGTTCAGCGAGGAAGAATGCCTCCAACTCAACCCAATCCAGGCCAGTACGCACTCACCAACGGGGACCCCCTCAACGGCCACTGCTACCTGTCCGGCTACATCTCGCTGCTGCTGCGCGCGGAGCCCTACCCCACGTCGCGCTACGGCAGCCAATGCATGCAGCCCAACAACATCATGGGCATCGAGAACATCTGCGAGCTGGCCGCGCGCCTGCTCTTCAGCGCCGTCGAGTGGGCCCGCAACATCCCCTTCTTCCCGGATCTGCAGATCACCGACCAGGTGTCCCTGCTACGCCTGACCTGGAGCGAGCTGTTCGTGCTCAACGCAGCCCAGTGCTCCATGCCGCTGCACGTGGCGCCGCTGCTGGCCGCCGCCGGCCTGCACGCCTCGCCCATGTCCGCCGACCGCGTCGTGGCCTTCATGGACCACATCCGCATCTTCCAGGAGCAGGTGGAGAAGCTCAAGGCGTTGCACGTCGACTCGGCCGAGTACAGCTGCCTCAAAGCCATCGTGCTGTTCACGTCAGATGCCTGTGGCCTGTCGGATGCCGCCCACATCGAGAGCCTGCAGGAGAAGTCGCAGTGCGCGCTGGAGGAGTACGTGAGGAGCCAGTACCCTAACCAGCCCAGCCGCTTCGGCAAACTGCTCCTACGACTGCCCTCGCTGCGCACCGTATCCTCCTCGGTCATCGAGCAGCTCTTCTTCGTCCGTTTGGTAGGTAAAACCCCCATCGAAACTCTCATCCGTGATATGTTACTGTCTGGGAGCAGCTTCAACTGGCCTTACATGTCTATCCAGTGCTCCTAG

Related Sequences

bmy_04043T0 Protein

Length: 377 aa      View alignments
>bmy_04043T0
MFWGRDDSQGRERLARPQLQGDKGQGPPGSGQSQQHIECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYTCRANRNCPIDQHHRNQCQYCRLKKCLKVGMRREAVQRGRMPPTQPNPGQYALTNGDPLNGHCYLSGYISLLLRAEPYPTSRYGSQCMQPNNIMGIENICELAARLLFSAVEWARNIPFFPDLQITDQVSLLRLTWSELFVLNAAQCSMPLHVAPLLAAAGLHASPMSADRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTSDACGLSDAAHIESLQEKSQCALEEYVRSQYPNQPSRFGKLLLRLPSLRTVSSSVIEQLFFVRLVGKTPIETLIRDMLLSGSSFNWPYMSIQCS*