Sequence detailsbmy_04043 (Coding sequence)

Part of scaffold_124 (SequenceType object (1))

For more information consult the page for scaffold_124 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NR2F1ENSTTRG00000001519 (Bottlenosed dolphin)

Gene Details

nuclear receptor subfamily 2, group F, member 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000001434, Bottlenosed dolphin)

Protein Percentage 100.0%
cDNA percentage 99.5%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0317)

NR2F1ENSBTAG00000017599 (Cow)

Gene Details

COUP transcription factor 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000023401, Cow)

Protein Percentage 99.15%
cDNA percentage 97.26%
Ka/Ks Ratio 0.01758 (Ka = 0.0034, Ks = 0.1911)

NR2F1 (Minke Whale)

Gene Details

nuclear receptor subfamily 2, group F, member 1

External Links

Gene match (Identifier: BACU017776, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 99.87%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0081)

Additional orthologs identified in other species via the OPTIC pipeline.

NR2F1 (Human)   Nr2f1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1131 bp    Location:1114265..1133861   Strand:+
Raw sequence 
>bmy_04043
ATGTTTTGGGGCCGGGATGATTCCCAGGGGAGGGAGCGCTTGGCCCGGCCTCAGCTTCAAGGGGACAAGGGCCAGGGCCCGCCCGGCTCGGGCCAGAGCCAGCAGCACATCGAGTGCGTGGTGTGCGGGGACAAGTCGAGCGGCAAGCACTACGGCCAGTTCACCTGCGAGGGCTGCAAAAGTTTCTTCAAGAGGAGCGTCCGCAGGAACTTAACTTACACATGCCGTGCCAACAGGAACTGTCCCATCGACCAGCACCACCGCAACCAGTGCCAATACTGCCGCCTCAAGAAGTGCCTCAAAGTGGGCATGAGGCGGGAAGCGGTTCAGCGAGGAAGAATGCCTCCAACTCAACCCAATCCAGGCCAGTACGCACTCACCAACGGGGACCCCCTCAACGGCCACTGCTACCTGTCCGGCTACATCTCGCTGCTGCTGCGCGCGGAGCCCTACCCCACGTCGCGCTACGGCAGCCAATGCATGCAGCCCAACAACATCATGGGCATCGAGAACATCTGCGAGCTGGCCGCGCGCCTGCTCTTCAGCGCCGTCGAGTGGGCCCGCAACATCCCCTTCTTCCCGGATCTGCAGATCACCGACCAGGTGTCCCTGCTACGCCTGACCTGGAGCGAGCTGTTCGTGCTCAACGCAGCCCAGTGCTCCATGCCGCTGCACGTGGCGCCGCTGCTGGCCGCCGCCGGCCTGCACGCCTCGCCCATGTCCGCCGACCGCGTCGTGGCCTTCATGGACCACATCCGCATCTTCCAGGAGCAGGTGGAGAAGCTCAAGGCGTTGCACGTCGACTCGGCCGAGTACAGCTGCCTCAAAGCCATCGTGCTGTTCACGTCAGATGCCTGTGGCCTGTCGGATGCCGCCCACATCGAGAGCCTGCAGGAGAAGTCGCAGTGCGCGCTGGAGGAGTACGTGAGGAGCCAGTACCCTAACCAGCCCAGCCGCTTCGGCAAACTGCTCCTACGACTGCCCTCGCTGCGCACCGTATCCTCCTCGGTCATCGAGCAGCTCTTCTTCGTCCGTTTGGTAGGTAAAACCCCCATCGAAACTCTCATCCGTGATATGTTACTGTCTGGGAGCAGCTTCAACTGGCCTTACATGTCTATCCAGTGCTCCTAG

Related Sequences

bmy_04043T0 SequenceType object (3)

Length: 377 aa      View alignments
>bmy_04043T0
MFWGRDDSQGRERLARPQLQGDKGQGPPGSGQSQQHIECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYTCRANRNCPIDQHHRNQCQYCRLKKCLKVGMRREAVQRGRMPPTQPNPGQYALTNGDPLNGHCYLSGYISLLLRAEPYPTSRYGSQCMQPNNIMGIENICELAARLLFSAVEWARNIPFFPDLQITDQVSLLRLTWSELFVLNAAQCSMPLHVAPLLAAAGLHASPMSADRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTSDACGLSDAAHIESLQEKSQCALEEYVRSQYPNQPSRFGKLLLRLPSLRTVSSSVIEQLFFVRLVGKTPIETLIRDMLLSGSSFNWPYMSIQCS*