Sequence details bmy_04050 (Coding sequence)

Part of scaffold_126 (Scaffold)

For more information consult the page for scaffold_126 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LMX1B ENSTTRG00000013199 (Bottlenosed dolphin)

Gene Details

LIM homeobox transcription factor 1, beta

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012522, Bottlenosed dolphin)

Protein Percentage 91.19%
cDNA percentage 93.09%
Ka/Ks Ratio 0.18902 (Ka = 0.0484, Ks = 0.256)

BT.84674 ENSBTAG00000010228 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000038577, Cow)

Protein Percentage 100.0%
cDNA percentage 96.15%
Ka/Ks Ratio 0.001 (Ka = 0.0004, Ks = 0.3693)

Additional orthologs identified in other species via the OPTIC pipeline.

LMX1B (Human)   Lmx1b (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1230 bp    Location:449938..455780   Strand:+
Raw sequence 
>bmy_04050
ATGCGCCCACTCTGCACCTGCAGGCTCTTCGCGGCCAAGTGCAGCGGCTGCATGGAGAAGATCGCCCCCACTGAGTTTGTGATGCGGGCGCTGGAGTGCGTGTACCACCTGGGCTGCTTCTGCTGCTGCGTGTGTGAGCGGCAGCTACGGAAGGGCGACGAGTTTGTGCTCAAGGAGGGCCAGCTACTGTGCAAGGGTGACTACGAGAAGGAGAAGGACCTGCTCAGCTCCGTGAGCCCCGACGAGTCCGACTCCGTGAAGAGCGAGGACGAAGATGGGGACATGAAGCCGGCCAAGGGACAGGGCAGCCAGAGTAAGGGCAGTGGGGACGACGGGAAGGACCCGCGGAGGCCCAAACGACCCCGGACCATCCTCACGACGCAGCAGCGAAGAGCCTTCAAGGCCTCCTTCGAGGTCTCCTCCAAGCCCTGCCGGAAGGTGAGGGGCGGCTGGGGTGGGGTGGAGGCTGACCCCCCCGCACGCGCCGCCTTTCCAGACACCACCCCTTCTGCTCCTGCCGGGGGCTGGGCGTCCCTCCCCCTCCCCGCCCATCCCCCCAAACCTGCTGCCTCCCAGCTGCTGCCCCCCCGCCTACCCCCAGGCCTGACCCGTCTCCTTCGCCATGGGCAGGTCCGAGAGACGCTGGCGGCAGAGACGGGCCTCAGCGTGCGTGTGGTCCAGGTCTGGTTTCAGAACCAAAGAGCAAAGGCACCTGCCACCCCGCTGGACAGGGGTGGGATGGGGAGGGGGTGCAGGCAGAAGGCCAGGGGCCTGATGAGGGTGGGGCGGGAACGCAGCGGGGCTGGAGGCGGAGACTGGCACACACTGTGTCTCCTGCAGATGAAGAAGCTGGCACGGCGGCACCAGCAGCAACAGGAGCAGCAGAACTCGCAGCGGCTGGGCCAGGAGGTCCTGTCGAGTCGCATGGAGGGCATGATGGCCTCCTACACGCCGCTGGCCCCGCCGCAGCAGCAGATCGTGGCCATGGAGCAGAGCCCCTACGGCAGCAGCGACCCCTTCCAGCAGGGCCTCACGCCGCCCCAAATGCCAGGTGACCACATGAACCCCTATGGGAACGACTCCATCTTCCACGACATCGACAGTGATACCTCCTTAACCAGCCTCAGCGACTGCTTCCTCGGCTCCTCGGATGTGGGCTCCCTGCAGGCCCGCGTGGGGAACCCCATCGACAGGCTCTACTCCATGCAGAGTTCCTACTTCGCCTCCTGA

Related Sequences

bmy_04050T0 Protein

Length: 410 aa      View alignments
>bmy_04050T0
MRPLCTCRLFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYEKEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRGGWGGVEADPPARAAFPDTTPSAPAGGWASLPLPAHPPKPAASQLLPPRLPPGLTRLLRHGQVRETLAAETGLSVRVVQVWFQNQRAKAPATPLDRGGMGRGCRQKARGLMRVGRERSGAGGGDWHTLCLLQMKKLARRHQQQQEQQNSQRLGQEVLSSRMEGMMASYTPLAPPQQQIVAMEQSPYGSSDPFQQGLTPPQMPGDHMNPYGNDSIFHDIDSDTSLTSLSDCFLGSSDVGSLQARVGNPIDRLYSMQSSYFAS*