Sequence detailsbmy_04064 (Coding sequence)

Part of scaffold_126 (SequenceType object (1))

For more information consult the page for scaffold_126 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TTC16ENSTTRG00000016459 (Bottlenosed dolphin)

Gene Details

tetratricopeptide repeat domain 16

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000015602, Bottlenosed dolphin)

Protein Percentage 89.78%
cDNA percentage 92.91%
Ka/Ks Ratio 0.37918 (Ka = 0.0592, Ks = 0.1562)

TTC16ENSBTAG00000013509 (Cow)

Gene Details

tetratricopeptide repeat protein 16

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000040770, Cow)

Protein Percentage 78.34%
cDNA percentage 85.98%
Ka/Ks Ratio 0.30849 (Ka = 0.1188, Ks = 0.385)

TTC16 (Minke Whale)

Gene Details

tetratricopeptide repeat domain 16

External Links

Gene match (Identifier: BACU016270, Minke Whale)

Protein Percentage 94.4%
cDNA percentage 95.86%
Ka/Ks Ratio 0.35712 (Ka = 0.0329, Ks = 0.092)

Additional orthologs identified in other species via the OPTIC pipeline.

TTC16 (Human)   Ttc16 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2892 bp    Location:1324767..1337726   Strand:+
Raw sequence 
>bmy_04064
AATGCTCTGGGGCTTGACCAGGCTCCCTCACAGCACATCCCAAAGCCATGGGTGATTCCAGTGCCAAAGGGGACCCTACAGCGCATCTTTGGGACCAGCCAGGTGTTCCGGAACTTTGATGACATAAAACCAAAGGCTGCGGGCTACCATCGAGGCCATCAGTGCTTGGAGCAAGAAGACTGGGAGGTGGCCGTGCTGTTCTTCTCCCGCGGCCTCCACCTGGACTCCCAGCTGGTAGAATTCTATGCCTTGAGAGCCGAGGCCTACATCCAGCTCTGCGACTTCTCCTCGGCCGCCCAGAACCTTCGAAAGGCCTCCTCCTCCCAGCCAGAGCACACGGACTACCTGGAGCGGCTCACCTTGGTGCTTTACCTGAAGGGCCAGTGCCTTTTCGAGCAATGCGCCTTTCTGGATGCACTGAACGTCTTCTCTCAAGCCTCTGAGCTCCAGCCTGAGAAATTCTGCTTCCGTTATCGATGCATGGCCTGTCTCCTGGCCCTCAAACGGCATCGTGAATGCCTCTCATTCGTCACCAAGGAGGTGAAGCATGGCACCACCAATGCCGATGTCTACATCCTCCGGGCCAGGCTCTACAACTTCTTTCAGAAGCCCAGCCTCTGCCATCGAGACCTACACAGTGCCTTGCTACTGGATCCCAAGCACCCACAGGCCAAGGTGCTGCTCAAGGTGATGGTGGGCCAGGCCCAAGAGGCACGCCAAGATGCCGGGATCCTGGCCGTGCAGGGCAAGCTGCAACATGCGCTGCAGGGCATCATGTACCGACGGCTCTGGGAGTTTGACTCCGCCGTGGAGGACTTCCTGAAGGCGTTGGACATGATGACCGAGCACCAGCAGGACCTGGTGCAGCAGGCGCAGCGCCAACTGCTGTTGGCCTACAACGACTTCGCGGTGCACTGCTACATGCAGGGCGCCTACCAGGAGAGCGTGCTGCTGCTCAACAAGGCACTCAAGGACGAGCAGCGGGAGAAAGGCCTCTACATCAACCGCGGTGATTGCTTCTTCCAGCTGGGCAACCTGACCTTTGCTGAGGCGGACTACCAGCAGGCGCTGGCGCTGAGTCCGAAGGACGAGGGCGCCCACCTGCGCATGGGCCTGCTGCAGGAGAAGTTGGGCTTCTGCGAGCAGAGGAGCAGGCAGTTCCAGAAGGCAGAGAACCGCTTCTCAATGGCCATCCAGCACAATCCCCAGAAGCCCCAGTACTACCTGTACCGCGCCAGGAGCCGGCAGCTCATGCAGAACATTTTTGGGGCCCGCCAGGATGTTGCCACTGTCCTGCTTCTTGACCCCAAACAACCGAAGCTGCTGCCACTGATGACCAACCTCTTCCCCGGCATGTCAGTGGAGGAGGTGCTTAACAGCCAGGTGGCCCACCTGGCCAGGCTGCAGCTGGAGCGGGTGGTGGAGCACAGCCTGCAGGCCGGCACCCCTCAGGATATCGTGGGGCAGCTCAAGGAGCGGGAACTAGAGCGCCAGAGGGCCCGGGCCCTGCAGCTTTCGTGGAAGCTGGAGCAGCCTTTGTTCGAGACCTCCAAAGAGCTAGAGGCCACTCGCCAGTCCCTGCAGGCAAAGCCAGAAGGCCCAGAGGAAGAGGCCAAGGCCCCTGTGGAGAAGGAGGTAACCCTAACCTGCGACCCTCGAGGAGCTCTAAGCGGCTGGACTTACAGAGCTGCGGCCACTGTGACCGTGCAGCCTGTGATCATGCAGCCTGTCTCTTGCCCTAGGAGAAGCTGGAGCCGGGTCCCAGCAAAGAGAGTCAGGACCACGTCCACCTCAGAGACGGAGACGTCCACTGTCTGCCAGGAATACGGGAGCACTTCAACCACTGTTGTGACATTCTCTGACTCCTCACTGCTAAGGACACAATCCTCAGACTTGGGGGACAAGAGGGAAGACCTAAGCCTGAGCCACAGCCCCAGAAAAACCAAGTCCACCCCAGGCCACAGCCAGAGGCCCAGCGAGCCCGAGGCCATCCAGGTCCAGAGCCAGAGGCCCAGCAGGACCAAGGCCATCCAGGTCCAGAGCCAGAGGCCCAGCAGGACCGAGGCCATCCGGGTCCAGAGCCAGAGGCCCAGCAGGACCGAGGCCGCCCTGAGCCAGAGGCCCAGCAGGACTGAGGCCAACCAGAGCCAGAGGCCCAGCAGGACCGAGGCCGACCAGGTCCAGAGCCAGAGGCCCAGCAGGACCGAGGCCGCCCAGGTCCAGAGCCGGAGGCCCAGCAAGACCAAGGCCACTCGGAGCCGGAGGCCCAGCGGGACTGAAGCCATCCAGGTCCAGAGCCAGAGGCCCAGCAGGACCGAGGCCGCCCTGGGCCAGAGCCAGAGGCCCAGCAGGACCGAGGCCGACCAGGTCCAGAGCCAGAGGCCCAGCAGGGCCAAGCCCGCCCAGGTCCAGAGCCGGAGGCCCAGCAAGACCGAGGCCACTCGGAGCCGGAGGCCCAGGGGGACTGAGGCCACCCAGGGCCAGAGCCAGAGGTCCAGCAGGACCGAGGCCACCTGGAGCCCAAGGCAAAAGCTCAACAAGACTAAGGCCACCCAGGGCTCAAGGCAGAGGCTCAGAAAGGCCAAGGGTGCCCATGGCCAGAGCTGGAGACCCAGAAAGCCTGGTGCCACCCAGGACTGGAGCTGGAGACTGATCCAAAGTCCCAGCAAGATCAAGACTTTCTATGACCCAAGTTGGAGCCCCTGCAACACTGAGGCCACTGAGGGCCAGGGCCACAGCCAGAGGCCCAGCCAGCCCAAGGCTGCCCAGAGCTGGAGCCAGAGCACAAGCCCAGGTTCCGGCAAGACCGAGGTCACCTGGGGACTGAGCCCAAGTCTCAGCAACACGCAGACCACCCAGGGCCTGAGACAGAACCCCAGCCCCGGCAGTTAG

Related Sequences

bmy_04064T0 SequenceType object (3)

Length: 964 aa      View alignments
>bmy_04064T0
NALGLDQAPSQHIPKPWVIPVPKGTLQRIFGTSQVFRNFDDIKPKAAGYHRGHQCLEQEDWEVAVLFFSRGLHLDSQLVEFYALRAEAYIQLCDFSSAAQNLRKASSSQPEHTDYLERLTLVLYLKGQCLFEQCAFLDALNVFSQASELQPEKFCFRYRCMACLLALKRHRECLSFVTKEVKHGTTNADVYILRARLYNFFQKPSLCHRDLHSALLLDPKHPQAKVLLKVMVGQAQEARQDAGILAVQGKLQHALQGIMYRRLWEFDSAVEDFLKALDMMTEHQQDLVQQAQRQLLLAYNDFAVHCYMQGAYQESVLLLNKALKDEQREKGLYINRGDCFFQLGNLTFAEADYQQALALSPKDEGAHLRMGLLQEKLGFCEQRSRQFQKAENRFSMAIQHNPQKPQYYLYRARSRQLMQNIFGARQDVATVLLLDPKQPKLLPLMTNLFPGMSVEEVLNSQVAHLARLQLERVVEHSLQAGTPQDIVGQLKERELERQRARALQLSWKLEQPLFETSKELEATRQSLQAKPEGPEEEAKAPVEKEVTLTCDPRGALSGWTYRAAATVTVQPVIMQPVSCPRRSWSRVPAKRVRTTSTSETETSTVCQEYGSTSTTVVTFSDSSLLRTQSSDLGDKREDLSLSHSPRKTKSTPGHSQRPSEPEAIQVQSQRPSRTKAIQVQSQRPSRTEAIRVQSQRPSRTEAALSQRPSRTEANQSQRPSRTEADQVQSQRPSRTEAAQVQSRRPSKTKATRSRRPSGTEAIQVQSQRPSRTEAALGQSQRPSRTEADQVQSQRPSRAKPAQVQSRRPSKTEATRSRRPRGTEATQGQSQRSSRTEATWSPRQKLNKTKATQGSRQRLRKAKGAHGQSWRPRKPGATQDWSWRLIQSPSKIKTFYDPSWSPCNTEATEGQGHSQRPSQPKAAQSWSQSTSPGSGKTEVTWGLSPSLSNTQTTQGLRQNPSPGS*