Sequence detailsbmy_04066 (Coding sequence)

Part of scaffold_126 (SequenceType object (1))

For more information consult the page for scaffold_126 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SH2D3CENSTTRG00000016461 (Bottlenosed dolphin)

Gene Details

SH2 domain containing 3C

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000015604, Bottlenosed dolphin)

Protein Percentage 93.09%
cDNA percentage 93.85%
Ka/Ks Ratio 0.28843 (Ka = 0.045, Ks = 0.1561)

SH2D3CENSBTAG00000015375 (Cow)

Gene Details

SH2 domain-containing protein 3C

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000020433, Cow)

Protein Percentage 90.96%
cDNA percentage 90.43%
Ka/Ks Ratio 0.16348 (Ka = 0.0551, Ks = 0.3368)

SH2D3C (Minke Whale)

Gene Details

SH2 domain containing 3C

External Links

Gene match (Identifier: BACU016269, Minke Whale)

Protein Percentage 94.15%
cDNA percentage 94.86%
Ka/Ks Ratio 0.33798 (Ka = 0.0401, Ks = 0.1187)

Additional orthologs identified in other species via the OPTIC pipeline.

SH2D3C (Human)   Sh2d3c (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1695 bp    Location:1370805..1343664   Strand:-
Raw sequence 
>bmy_04066
ATGACTGCGGTGGGCCGAAGGTGCCCCGCACTGGGACCCAGAGGGGCCACTGGAGAGCTGGAGGCTGGCGGGGACTATGTGAAGTTCTCCAAGGAGAAGTACATCCTGGACTCATCGCCTGAGAAATTGCACAAGGAGTTGGAGGAAGAGCTCAAACTCAGCAGCACAGATCTCCGCAGCCACGCCTGGTACCATGGCCGCATCCCCCGTGAGGTCTCCGAGACCCTGGTGCAGCGCAATGGTGACTTCCTCATCCGGGACTCGCTCACCAGCCTGGGCGACTATGTGCTCACCTGCCGCTGGCGCAACCAGGCCTTGCACTTCAAGATCAACAAGGTGGTGGTGAAGGCGGGTGAGAGCTACACCCACATCCAGTACCTGTTCGAGCAGGAGAGCTTCGACCACGTGCCGGCCCTTGTGCGGTATCACGTGGGCAGCCGCAAGGCTGTGTCAGAGCAGAGTGGCGCCATCATCTACTGCCCCGTCAACCGCACCTTCCCGCTGCGCTACCTGGAGGCCTGCTACGGCCTGGGCCAGGGCAGTGGCAAGGCTACCAGCCCCGCCAGCCCCTCAGGCCCCAAGGGCAGCCACATGAAGCGGCGCAGTGTCACCATGACCGACGGGCTCACCGCCGACAAGGTCACCCGCAGTGACGGCTGCCCCACCAGCACATCACTGCCCCACCCCCGGGAATCCATCCGCAACTGTGCACTCAGCATGGACCAGATCCCAGACCTGCACTCTCCCGTGTCCCCCATCTCCGAGAGCCCCAGCTCCCCCGCCTATAGTACCGTGACCCGTGTCCACGCCGCCCCTGCAGCCCCCTCAGCCACAGCGCTGCCTGCTTCCCCTGTCACCCGCCGCTCCAGTGAACCCCAGCTGTGTCCTGGAAGTGCCGGGGAGTCGGACAAGGGCCCTTACTCCAGCCCCTCCCACACCCGCTGCGAGGCCTCCCCATCACCGTCGCTCAGCAGCTACAGCGACCCGGACTCTGGCCATTACTGCCAGCTCCAGCCTCCTGTCCGTGGCAGCCGAGAGTGGGCAGCAGCTGAGGCCTCCAGCCGCCAGGCCAGGAGCTATGGGGAGAGGCTTAAGGAACTGTCAGAAAATGGGGCCCCCGAAGGAGACTGGGGTAGGACCTTCACAGTCCCCATCGTGGAAGCCACCTCTTCCTTCAACCCGGCTACCTTCCAGTCACCACTGATCCCCAAAGATAACCGGCCACTGGAGATGGGCCTCCTGCGTAAGGTCAAGGAGCTGCTGGCAGAGGTTGATGCCCGGACGCTGGCCCAGCATGTCACCAAGGTTGACTGCCTGGTTGCTAGGATACTGGGCGTTACCAAGGAGATGCAGACCCTAATGGGAGTCCGCTGGGGCATGGAGCTGCTCACTCTCCCCCATGGCCGGCAGCTACGACTAGACCTGCTGGAAAGGTTCCACACCATGTCCATCATGCTGGCCGTGGACATCCTGGGCTGCACGGGCTCCGCTGAGGAGCGGGCAGCTCTTCTGCACAAGACCATCCAGCTGGCGGCCGAGCTTCGGGGGACCATGGGCAACATGTTCAGCTTCGCTGCAGTCATGGGCGCCCTGGATATGGCCCAGGTACTGAGCGGCCCATGTAGAGCTGGGCATAAGCTAGTCTCTGTCCGGAGAAGCCCTGGGATGTGTTCCTTTGGGATAGCTGTATATTGA

Related Sequences

bmy_04066T0 SequenceType object (3)

Length: 565 aa      View alignments
>bmy_04066T0
MTAVGRRCPALGPRGATGELEAGGDYVKFSKEKYILDSSPEKLHKELEEELKLSSTDLRSHAWYHGRIPREVSETLVQRNGDFLIRDSLTSLGDYVLTCRWRNQALHFKINKVVVKAGESYTHIQYLFEQESFDHVPALVRYHVGSRKAVSEQSGAIIYCPVNRTFPLRYLEACYGLGQGSGKATSPASPSGPKGSHMKRRSVTMTDGLTADKVTRSDGCPTSTSLPHPRESIRNCALSMDQIPDLHSPVSPISESPSSPAYSTVTRVHAAPAAPSATALPASPVTRRSSEPQLCPGSAGESDKGPYSSPSHTRCEASPSPSLSSYSDPDSGHYCQLQPPVRGSREWAAAEASSRQARSYGERLKELSENGAPEGDWGRTFTVPIVEATSSFNPATFQSPLIPKDNRPLEMGLLRKVKELLAEVDARTLAQHVTKVDCLVARILGVTKEMQTLMGVRWGMELLTLPHGRQLRLDLLERFHTMSIMLAVDILGCTGSAEERAALLHKTIQLAAELRGTMGNMFSFAAVMGALDMAQVLSGPCRAGHKLVSVRRSPGMCSFGIAVY*