Sequence details bmy_04080 (Coding sequence)

Part of scaffold_126 (Scaffold)

For more information consult the page for scaffold_126 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LCN2 ENSTTRG00000016477 (Bottlenosed dolphin)

Gene Details

lipocalin 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015620, Bottlenosed dolphin)

Protein Percentage 95.98%
cDNA percentage 97.32%
Ka/Ks Ratio 0.29687 (Ka = 0.0193, Ks = 0.065)

BT.61865 ENSBTAG00000014149 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000018806, Cow)

Protein Percentage 73.37%
cDNA percentage 85.59%
Ka/Ks Ratio 0.53049 (Ka = 0.1455, Ks = 0.2743)

Additional orthologs identified in other species via the OPTIC pipeline.

LCN2 (Human)   Lcn2 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 600 bp    Location:1678545..1682441   Strand:+
Raw sequence 
>bmy_04080
ATGCCCCTAGGTCTCCTGTGGCTGGGCCTCAGCCTGCTGGGGCCCCTCCACACCCAAGCCCAGGATTCCACCCCCAACCTGATCCCGGCCCCACCTCTGTTCAGGGTCCCACTGCAGCCCAACTTCCAGGCTGACCAGTTCCAGGGGAAGTGGTACATCGTAGGCTTGGCAGGGAATGCACTTAAGAAGGAAGAACAAGGCCAGTTTAAGATGTACGCCACCACCTACGAGCTGAAAGAAGATCGCAGCTACAATGTCACCTCCACCCTGCTCAGGGACGAGCGCTGTGACCACTGGATCAGAACTTTTGTCCCAAGTTCCCGGCCCGGCCAGTTCACCCTGGGCAATATTAAGGGCTTCCCCGGGGTGCAGAGCTATACCGTGCGAGTGGCGACTACCAACTACAACCAGTTTGCCATAGTGTACTTCAAGAAGGTTTACAAGAACCAGGAGTACTTCAAGACCACCCTTTACGGGAGGACCAAGGAGCTGACCCCTCAGCTGAAGGAGAACTTCATCCACTTCGCCAAATCCCTGGGCCTCACCGATGAGTACATCCTCTTCCCTGTCCCAATCGACCAGTGCATCGATGACCAGTGA

Related Sequences

bmy_04080T0 Protein

Length: 200 aa      View alignments
>bmy_04080T0
MPLGLLWLGLSLLGPLHTQAQDSTPNLIPAPPLFRVPLQPNFQADQFQGKWYIVGLAGNALKKEEQGQFKMYATTYELKEDRSYNVTSTLLRDERCDHWIRTFVPSSRPGQFTLGNIKGFPGVQSYTVRVATTNYNQFAIVYFKKVYKNQEYFKTTLYGRTKELTPQLKENFIHFAKSLGLTDEYILFPVPIDQCIDDQ*