Part of scaffold_127 (Scaffold)

For more information consult the page for scaffold_127 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ATG13 ENSTTRG00000000447 (Bottlenosed dolphin)

Gene Details

autophagy related 13

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000419, Bottlenosed dolphin)

Protein Percentage 91.27%
cDNA percentage 90.99%
Ka/Ks Ratio 0.09679 (Ka = 0.0021, Ks = 0.0221)

ATG13 ENSBTAG00000017325 (Cow)

Gene Details

Autophagy-related protein 13

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000023036, Cow)

Protein Percentage 87.45%
cDNA percentage 87.94%
Ka/Ks Ratio 0.38579 (Ka = 0.097, Ks = 0.2514)

ATG13  (Minke Whale)

Gene Details

autophagy related 13

External Links

Gene match (Identifier: BACU018369, Minke Whale)

Protein Percentage 91.43%
cDNA percentage 93.85%
Ka/Ks Ratio 0.93626 (Ka = 0.0639, Ks = 0.0683)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1491 bp    Location:960539..985877   Strand:+
>bmy_04113
ATGGAAACTGATCTCAATTCCCAGGACAGAAAGGACCTGGACAAGTTCATTAAGTTTTTTGCCCTCAAGACTGTCCAAGTGATTGTCCAGGCTCGACTGGGCGAGAAGATTTGTACTCGTTCATCTTCTTCCCCAACGGGTTCAGACTGGTTCAATTTAGCAATCAAAGACATCCCAGAGGTTACACATGAAGCAAAGAAGGCGCTGGCAGGGCAGCTGCCTGCCGTCGGGAGGTCTATGTGTGTGGAGATCTCACTCAAGACTTCTGAGGGAGATTCCATGGAGCTAGAAATCTGGTGTCTGGAAATGAATGAAAAGTGTGATAAAGAAATCAAAGTTTCCTATGCCGTGTACAACAGACTGTCGTTGCTACTGAAGTCTCTCCTTGCTATAACTAGGGTGACACCAGCTTACAGACTCTCCAGGAAACAAGGGCATGAATATGTCATATTGTACAGAATATATTTTGGGGAAGTTCAGCTGAATGGCTTAGGAGAAGGTTTCCAGACAGTTCGTGTTGGGACAGTGGGTACCCCTGTGGGCACCATCACTCTTTCTTGTGCTTACAGAATTAACTTGGCATTCATGTCCACCAGAACCGCTGGTGAGGACACTGGAGTAACATATCCTTCTGTGGAAGATTCTCAAGAAGTGTGTACCACCTCTTTTTCCACCTCCCCTCCATCCCAGTGTGTGTTTACTGTCACAAAGGCACATTTTCAGACCCCTACTCCTGTGGTGACGGACACTCTGAGGGTCCCCATGGCAGGACTGGCCTTTTCCCATCAACTAATGGTTCCTGGGAAGGAAGGTGGGGTACCCCTTGCTCCCAACCAGCCTGCCCACGGTGCCCAGGCTGGTGACCAGGAGAGACTGGCAACCTACACCCCTTCCGATGGGGCCCACTGCGCTGCCACACCTTCCAGCAGTGAGGATACTGAAACTGTGTCAAACAGCAGTGAGGGACGGGCCTCCCCCCATGATGTCTTGGAGACCATCTTTGTCCGGAAAGTGGGGGCTTTTGTCAACAAACCCATCAACCAGGTGACCCTGACCAGTTTGGACATACCCTTTGCCATGTTTGCTCCCAAGAATTTGGAGCTGGAGGATGTGGATCCCATGCCAGTGCCCAGAACCAGCCCCTACCTCTGCCTTATTCTGAAACAGGTGAATCCTCCAGATTCCCCAGAGACTACATCTCCTCTTCAGGGCAGCCTGCACTCTGATGGCTCCAGCGGGGGCAGCAGTGGCAATACCCAGGACGACTTTGTCATGATCGACTTCAAACCAGCTTTTTCTAAAGACGACATTCTTCCGATGGACTTGGGGACCTTCTATCGTGAATTTCAGAACCCCCCTCAGCTGAGCAGCCTCTCCATAGATATCGGGGCACAGTCCATGGCTGAGGACTTGGACTCACTACCAGAGAAGCTGGCTGTGCACGAGAAGAATGTCCGAGAATTTGATGCCTTTGTAGAAACCCTGCAGTAA

Related Sequences

bmy_04113T0 Protein

Length: 497 aa      View alignments
>bmy_04113T0
METDLNSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPEVTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYAVYNRLSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLNGLGEGFQTVRVGTVGTPVGTITLSCAYRINLAFMSTRTAGEDTGVTYPSVEDSQEVCTTSFSTSPPSQCVFTVTKAHFQTPTPVVTDTLRVPMAGLAFSHQLMVPGKEGGVPLAPNQPAHGAQAGDQERLATYTPSDGAHCAATPSSSEDTETVSNSSEGRASPHDVLETIFVRKVGAFVNKPINQVTLTSLDIPFAMFAPKNLELEDVDPMPVPRTSPYLCLILKQVNPPDSPETTSPLQGSLHSDGSSGGSSGNTQDDFVMIDFKPAFSKDDILPMDLGTFYREFQNPPQLSSLSIDIGAQSMAEDLDSLPEKLAVHEKNVREFDAFVETLQ*