Sequence detailsbmy_04114 (Coding sequence)

Part of scaffold_127 (SequenceType object (1))

For more information consult the page for scaffold_127 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ARHGAP1ENSTTRG00000000448 (Bottlenosed dolphin)

Gene Details

Rho GTPase activating protein 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000000421, Bottlenosed dolphin)

Protein Percentage 87.24%
cDNA percentage 87.24%
Ka/Ks Ratio 0.27236 (Ka = 0.013, Ks = 0.0478)

ARHGAP1ENSBTAG00000016501 (Cow)

Gene Details

rho GTPase-activating protein 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000041467, Cow)

Protein Percentage 96.17%
cDNA percentage 93.03%
Ka/Ks Ratio 0.05318 (Ka = 0.0196, Ks = 0.3692)

ARHGAP1 (Minke Whale)

Gene Details

Rho GTPase activating protein 1

External Links

Gene match (Identifier: BACU008949, Minke Whale)

Protein Percentage 99.23%
cDNA percentage 99.49%
Ka/Ks Ratio 0.47183 (Ka = 0.0043, Ks = 0.009)

Additional orthologs identified in other species via the OPTIC pipeline.

ARHGAP1 (Human)   Arhgap1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1317 bp    Location:1007820..988226   Strand:-
Raw sequence 
>bmy_04114
TCAGGGAGGGGGTGGTTCCCATTCGACCGCGGAGCCGGATGTTTGCCTGTCTTTGACAGGCGTGGCGGAGGGAGCGGTGCACCACCACGGGTTCTCTTCAGGTTCTGCAGCGTGAAGCTGTGGGGCAGAGGCTTGGCCATGGACCCACTCTCAGAGCTGCAGGACGACCTGACTTTGGATGACACCAGCCAGGCTCTGAACCAGCTGAAGCTAGCCTCCATTGATGAGAAAAACTGGCCCTCAGACGAAATGCCCGACTTTCCCAAGTCAGATGACTCCAAAAGCAGCTCCCCGGAACCTGTCACACACCTGAAGTGGGATGACCCTTACTACGACATTGCCCGGCACCAGATTGTGGAGGTGGCAGGAGATGACAAGTATGGGCGGAAGATCATTGTGTTTAGTGCCTGCCGAATGCCCCCGAGCCACCAGCTGGACCATAGCAAGCTCCTGGGGTACCTGAAGCACACCCTGGACCAGTATGTGGAGAGCGACTACACGCTGCTCTACCTGCACCACGGCCTGACCAGCGACAACAAGCCCTCCCTCAGCTGGCTCCGGGACGCCTACCGGGAGTTTGACCGCAAGTGGGCTCTGTACATCGTGCACCCCACCATGTTCATCAAGACCCTGCTCATCCTCTTCAAGCCCATCATTAGCTTCAAGTTTGGGCAGAAGATCTTCTATGTGAATTACCTGAGTGAGCTGAGCGAGCATGTGAAGCTGGAGCAACTGGGGATCCCTCGCCAAGTGCTCAACCTCCGGGAGAAGAACCCAGAGCAGGAGCCCATTCCGCTCGTGCTGCGGGAGACCGTTGCCTACCTACAGGCCCACGCTCTCACCACTGAGGGCATTTTCCGGAGGTCGGCCAACACCCAAGTTGTTCGGGAAGTGCAACAGAAGTACAACATGGGGCTGCCTGTGGACTTCCACCAGTACAATGAGTTGCACCTGCCAGCGGTCATTCTCAAGACCTTCCTCCGGGAGCTTCCTGAGCCCCTGCTCACCTTTGACCTCTACTCCCACGTTGTGGGCTTCCTCAACATTGACGAGAGCCAGAGAGTGGAGGCGACGCTGCAGGCCTTCCAGATGCTGCCCGAGGAGAACTACCTGGTGCTGCGCTTCCTCACTGCCTTCCTGGTGCAGATTTCTGCCCTCTGTGACCAGAACAAGATGACCAACACTAACCTGGCTGTTGTCTTCGGCCCTAACCTGCTGTGGGCCAAGGATGCTGCCATCACCCTCAAGGCCATTAATCCCATCAATACCTTCACTAAGTTCCTCCTGGATCATCAAGGGGAGTTGTTTCAGCCCTGA

Related Sequences

bmy_04114T0 SequenceType object (3)

Length: 439 aa      View alignments
>bmy_04114T0
SGRGWFPFDRGAGCLPVFDRRGGGSGAPPRVLFRFCSVKLWGRGLAMDPLSELQDDLTLDDTSQALNQLKLASIDEKNWPSDEMPDFPKSDDSKSSSPEPVTHLKWDDPYYDIARHQIVEVAGDDKYGRKIIVFSACRMPPSHQLDHSKLLGYLKHTLDQYVESDYTLLYLHHGLTSDNKPSLSWLRDAYREFDRKWALYIVHPTMFIKTLLILFKPIISFKFGQKIFYVNYLSELSEHVKLEQLGIPRQVLNLREKNPEQEPIPLVLRETVAYLQAHALTTEGIFRRSANTQVVREVQQKYNMGLPVDFHQYNELHLPAVILKTFLRELPEPLLTFDLYSHVVGFLNIDESQRVEATLQAFQMLPEENYLVLRFLTAFLVQISALCDQNKMTNTNLAVVFGPNLLWAKDAAITLKAINPINTFTKFLLDHQGELFQP*