Sequence details bmy_04115 (Coding sequence)

Part of scaffold_127 (Scaffold)

For more information consult the page for scaffold_127 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ZNF408 ENSBTAG00000027557 (Cow)

Gene Details

zinc finger protein 408

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000039420, Cow)

Protein Percentage 84.73%
cDNA percentage 88.33%
Ka/Ks Ratio 0.20478 (Ka = 0.0761, Ks = 0.3714)

ZNF408  (Minke Whale)

Gene Details

zinc finger protein 408

External Links

Gene match (Identifier: BACU008950, Minke Whale)

Protein Percentage 98.14%
cDNA percentage 98.48%
Ka/Ks Ratio 0.23181 (Ka = 0.0087, Ks = 0.0373)

Additional orthologs identified in other species via the OPTIC pipeline.

ZNF408 (Human)   Zfp408 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 2103 bp    Location:1008230..1013242   Strand:+
Raw sequence 
>bmy_04115
ATGGAGGAGGCGAAGGAGCTGCCCTTGGAGTGGGAGAGACTGCAGTTCGCCCCCGATCCACGCCTGGGCCCGGACTCAGGATGGAGCCTTTCCAGAGAAGGCTGTGCACAGGAGCTCAAAGACTTCTCGCCCGGACCTACCCGAGTCATCCTCGCTCTAAAGAGCCTCCCGCGGGGCTTGGCCCTTGGCCCCTCACTCATCAAGGAGAAGCGCTTGGGGGTCTGGTGTGTTGGGGAACCCTTGCAGCCGGGACTGCTCTGGGGGCCACTGGAAGAAGAGTCTGTCTCCGAGCAGAAGGGCCATGGAGTGAAAACAAAGCAGAAGGAGGACGTGTCACTAGGCCCATGGGGAGATGTGTGTGCTTGTGAGCAGAGTTCAGGCTGGACTAGTTTGGTGCAGCGGGGCAGGCTGGAGGGTGAGGGAAACGTGGCCCCAGTGCGGATCAGCGAGAGGCTCCACCTGCAGGTGTACCGGGTCGTGCTGCCAGGTTTTGAGCTGCTGATGTGGCCCCAGCCTCCCTCGGAGGGCCTGAGCCCCACCCAGCCCAGGCTAGAGGAAGAGGCATCCTTGGCTGTGGTGACAGAAGTGGAGTCTGCTTCACCCACCCGCATCCAGGCAGTGAGCCCTGGACTTAAGCCCCAAATCCAGGACCAGGTTTCCAAAGAGAGCCAGCCACTCGGCCCATTGCCTCAGGATGGCCGTGTAGACGAGGAGGACCCACCCCAGACCCAGATGCCACCTGAACCTCAGAGCAGCTCCACTCCCCAGCAGGGCCCTGAGAGCAGTGAGGCCAGTTCCTCATCTTCTGCCAGGGGCCCCCAGCTGCGTGCTTACCTAGTCAAGAAGTTGCGTAGCCCCAGTGATCAACGGCCACCCAGAGCGAAGACCTCAGAGCCCGGGGCCCGGCAGAGCGGAGAGCAGCAGCACCCTGGCTTCCCCGCATGCTTGCGGAGCGCCCCTGGCCCGGTGGGAGGCTCCCCGAAGCGGGGGCGACGGTACCGCTGTGCGGAGTGCGGCAAGGCCTTCCTGCAGCTTTGCCACCTGAAGAAGCATGCGTTCGTGCACACAGGCCACAAGCCCTTCCTTTGCACCGAGTGTGGCAAGAGCTACAGCTCAGAGGAGAGCTTCAAAGCCCACATGCTGGGCCACCGTGGGGTGCGGCCATTCCCCTGCCCTCAGTGCACCAAGGCCTACGGTACCCGGCGAGACCTCAGAGAGCACCAGGTTGTACACTCAGGTGCCCGGCCCTTTGCTTGCGACCAGTGTGGCAAGGCCTTCACCCGCCGGCCCTCCCTGCGGCTGCATCGCAAGACACACCAGGTGCCGGCGGCCCCTGCCCCTTGCCCGTGCCCGGTGTGCGGGCGGCCCCTGGCCAACCAGGGCTCCCTGCGGAACCACATGCGGCTCCACACGGGGGAGAAGCCCTTCCTGTGCCCACACTGCGGCCGGGCGTTCCGCCAGCGGGGCAGCCTGCGAGGGCACCTGCGGCTGCACACAGGGGAGCGCCCTTACCGCTGCCCACACTGTGCTGACGCCTTCCCCCAGCTGCCTGAACTGCGGCGCCACCTCATCTCCCACACCGGGGAGGCCCACCTGTGCCCCGTGTGTGGGAAGGCCCTCCGGGATCCCCACACGCTGCGTGCGCACGAGCGCTTACACTCAGGCGAGAGGCCCTTCCCGTGCCCCCAGTGCGGCCGTGCTTACACGCTGGCGACCAAGCTGAGGCGCCACCTCAAATCCCACCTGGCTGACAAGCCCTACCGCTGCCCCACCTGTGGCATGGGCTACACTCTCCTCCAAAGCCTCAAGCGGCACCAGCTCAGTCATCAGCCCGGGGCACCCTCCAGCCCACCCTGTGTGCCGCCTGCCACTTCTGAGCCCACCGTGGTGCTCCTGCAGACCGAGCCAGAACTACTGGACACATGCAGTGAACGGGGCGGATCCCCAGCCCCGGACGTCTTCGAGGTCACCCTTTCCGAGAGCCAGGATAAGTGCTTTGTGGTGCCCGAGGAGCCAGGTCCAGCTCCCAGCCTGGTGCTCATCCATAAGGACGTGGGCTTTAGCACCTGGGCAGAAGTGGTGGAGGTGGAGACGGGCACCTGA

Related Sequences

bmy_04115T0 Protein

Length: 701 aa      View alignments
>bmy_04115T0
MEEAKELPLEWERLQFAPDPRLGPDSGWSLSREGCAQELKDFSPGPTRVILALKSLPRGLALGPSLIKEKRLGVWCVGEPLQPGLLWGPLEEESVSEQKGHGVKTKQKEDVSLGPWGDVCACEQSSGWTSLVQRGRLEGEGNVAPVRISERLHLQVYRVVLPGFELLMWPQPPSEGLSPTQPRLEEEASLAVVTEVESASPTRIQAVSPGLKPQIQDQVSKESQPLGPLPQDGRVDEEDPPQTQMPPEPQSSSTPQQGPESSEASSSSSARGPQLRAYLVKKLRSPSDQRPPRAKTSEPGARQSGEQQHPGFPACLRSAPGPVGGSPKRGRRYRCAECGKAFLQLCHLKKHAFVHTGHKPFLCTECGKSYSSEESFKAHMLGHRGVRPFPCPQCTKAYGTRRDLREHQVVHSGARPFACDQCGKAFTRRPSLRLHRKTHQVPAAPAPCPCPVCGRPLANQGSLRNHMRLHTGEKPFLCPHCGRAFRQRGSLRGHLRLHTGERPYRCPHCADAFPQLPELRRHLISHTGEAHLCPVCGKALRDPHTLRAHERLHSGERPFPCPQCGRAYTLATKLRRHLKSHLADKPYRCPTCGMGYTLLQSLKRHQLSHQPGAPSSPPCVPPATSEPTVVLLQTEPELLDTCSERGGSPAPDVFEVTLSESQDKCFVVPEEPGPAPSLVLIHKDVGFSTWAEVVEVETGT*