Part of scaffold_127 (Scaffold)

For more information consult the page for scaffold_127 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PACSIN3 ENSTTRG00000014143 (Bottlenosed dolphin)

Gene Details

protein kinase C and casein kinase substrate in neurons 3

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013413, Bottlenosed dolphin)

Protein Percentage 98.1%
cDNA percentage 98.1%
Ka/Ks Ratio 0.10836 (Ka = 0.0079, Ks = 0.0733)

PACSIN3 ENSBTAG00000009576 (Cow)

Gene Details

protein kinase C and casein kinase substrate in neurons protein 3

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000012594, Cow)

Protein Percentage 94.05%
cDNA percentage 93.33%
Ka/Ks Ratio 0.07534 (Ka = 0.0266, Ks = 0.3531)

PACSIN3  (Minke Whale)

Gene Details

protein kinase C and casein kinase substrate in neurons 3

External Links

Gene match (Identifier: BACU008955, Minke Whale)

Protein Percentage 98.21%
cDNA percentage 98.58%
Ka/Ks Ratio 0.16965 (Ka = 0.0075, Ks = 0.0444)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2280 bp    Location:1434743..1427534   Strand:-
>bmy_04122
ATGGGCTCCGGGTCGTGCAGCGCTGGGCCCGCAAGAGGGCCAGGTCGAAGGGAGCCGTCCTTAAGGGTTGAGGTTAGAGACGGCAGACCCTGGCCTCCGAGGTTTGGTGTGAGCGCTCCGGCTTTGGAGCGCGTCATCAGGGAGCAGGCACCTCAGGCGGCAGGTCGGGTTTCCAAAAGCGCCCCTTTGTTATGCCCCTCCCTGGCCCTGCCTCCTCTTCTTTCCCCGCGCCACCTCCTCCCCCAGCCTCCCGGGCCTCTCTGGCTGCTGGTTCCAGTCGCTCTTGCCCAAGTACCCCTCTCTGGACCAGTCGACCGGCCCCTTCTGTGCCTTCAAATCCTCGGGCTGCGGACGGATCGGGAGGGGCAGCTGGGAGAAGAGGTCCTGAGGCCGAGCCTGTGCCTCAAGACAGAGGATGGGCAGGGCAGGGCAGCAGTGCTCCCTCCCAGGGGCATGTCCCCGGCTCCTGGAAAGGGTGGGGGCTGGTCTGGTTGGGGGTACATACCAGCCTCAGGGGCCAAGGCACAAGGCCCACCCCTGCTGCTAGGTCCCGTGGGGCAGTGGGGCCTGGCTGTGCCTGGGGCTTGGGCTTGTGTTTGCTCTGGGAGGCCGAAGGGAGCAGTGCCAGCCCTGCACACACAGCTTGCTCTGTTCTGGGGCCAGAGAGAGGGAACGGGTGGGGGGCAGCTCTCCCGGGAGCCAGGAGCACAGAGGCTGGAGCAGGCAGGGGGCCCAGGCCCCTGGATGCCTGACTGGGACAGCTCTGAGGCCCTGGGATTTACAGCTGCAGCTCGGTTTCTCTCCATCTGGTTGGCAAGTCCTTTCTGGCTACTAACTCACTCCAGTGCCTGCAGAAACACAAACTGGACCCTCAGGAAGTCTCTGCCAGTGACTGGGAACAGATCCTGTCCTGTAGTCACGACCCAGTGGGATATAGAGGGTGTGTGTCTGGCTTCCCTGCTTACCCCTCTGCCCTCTACAGCTCTAACCGCCACCATTCCGTGCTGTGGGGACACCATGGCTCCAGAGGAAGATGCTGGAGGGGAGGCCCTAGAGGGCAGTTTCTGGGAGGCCGGCAACTACAGGCGGACGGTGCAGCGGGTGGAGGATGGGCATCGGCTGTGTGGGGACCTGGTCAGCTGCTTCCAGGAGCGCGCCCGCATCGAGAAGGCCTATGCCCAGCAGCTGGCCGAATGGGCCCGCAAGTGGAGGGGCTCTGTGGAGAAGGGCCCTCAGTACGGCACGCTGGAGAAGGCCTGGCATGCCTTCTTCACTGCGGCCGAGCGGCTGAGCGCCCTGCACCTGGAGGTGCGGGAGAAGCTGCAGGGCCAGGACAGCGAGCGGGTGCGCGCCTGGCAGCGGGGGGCCTTCCACCGGCCTGTGCTGGGTGGCTTCCGCGAGAGCCGGGCTGCCGAGGACAGCTTCCGCAAGGCCCAGAAGCCCTGGCTAAAGAGGCTGAAGGAGGTCGAGGCTTCCAAGAAGAGCTACCACGCGGCCCGGAAGGAGGAGAAGACAGCCCAGACTCGGGAGAGCCACGCGAAGGCAGACAGCGCCGTCTCCCAGGAGCAGCTGCGGAAGCTGCAGGAGCGGGTGGAACGCTGCTCCAAGGAGTCCGAGAAGTACAAGCAGACACTGGTGGAGCTGCATCGTTACACCCCACGCTACATGGAGGACATGGAGCAGGCCTTCGAGACCTGCCAGGCTGCCGAGCGCCAGCGGCTTCTCTTCTTCAAGGATATGCTGCTCACCTTACACCAGCACCTTGACCTCTCCAGCAGTGAGAGGTTCCACGAACTCCACCGAGACCTGCATCAGGGCATCGAGGCAGCCAGCGACAGGGAGGATCTGCGGTGGTGGCGCAGCACCCACGGGCCGGGCATGGCCATGAACTGGCCCCAGTTTGAGGAGTGGTCCTTGGACACACACAGGACAATCAGCCGGAAGGAGAAGGGTGGCCGGAGCCCTGACGAGGTTACTCTGACCAGCATCGTACCCGCAAGAGATGGCGCTGCATCCCCACCCCAGTCCCTGGGGTCCCCAGGCGGCGGGCAGGATGAGGAGTGGTCAGATGAGGAGAACCCCCGGAAGGTTGCTACTGGGGTCCGGGTGCGGGCACTTTATGACTACGCGGGCCAGGAAGCTGATGAGCTGAGCTTCCGAGCAGGGGAGGAGCTGCTGAAGATGAGTGAGGAGGATGAGCAGGGCTGGTGTCAGGGCCAGCTGCAGAGTGGCAGGATTGGCCTGTACCCTGCCAACTACGTGGAGTGTGTGGGGGCCTGA

Related Sequences

bmy_04122T0 Protein

Length: 760 aa      View alignments
>bmy_04122T0
MGSGSCSAGPARGPGRREPSLRVEVRDGRPWPPRFGVSAPALERVIREQAPQAAGRVSKSAPLLCPSLALPPLLSPRHLLPQPPGPLWLLVPVALAQVPLSGPVDRPLLCLQILGLRTDREGQLGEEVLRPSLCLKTEDGQGRAAVLPPRGMSPAPGKGGGWSGWGYIPASGAKAQGPPLLLGPVGQWGLAVPGAWACVCSGRPKGAVPALHTQLALFWGQREGTGGGQLSREPGAQRLEQAGGPGPWMPDWDSSEALGFTAAARFLSIWLASPFWLLTHSSACRNTNWTLRKSLPVTGNRSCPVVTTQWDIEGVCLASLLTPLPSTALTATIPCCGDTMAPEEDAGGEALEGSFWEAGNYRRTVQRVEDGHRLCGDLVSCFQERARIEKAYAQQLAEWARKWRGSVEKGPQYGTLEKAWHAFFTAAERLSALHLEVREKLQGQDSERVRAWQRGAFHRPVLGGFRESRAAEDSFRKAQKPWLKRLKEVEASKKSYHAARKEEKTAQTRESHAKADSAVSQEQLRKLQERVERCSKESEKYKQTLVELHRYTPRYMEDMEQAFETCQAAERQRLLFFKDMLLTLHQHLDLSSSERFHELHRDLHQGIEAASDREDLRWWRSTHGPGMAMNWPQFEEWSLDTHRTISRKEKGGRSPDEVTLTSIVPARDGAASPPQSLGSPGGGQDEEWSDEENPRKVATGVRVRALYDYAGQEADELSFRAGEELLKMSEEDEQGWCQGQLQSGRIGLYPANYVECVGA*