Part of scaffold_127 (Scaffold)

For more information consult the page for scaffold_127 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NR1H3 ENSTTRG00000014149 (Bottlenosed dolphin)

Gene Details

nuclear receptor subfamily 1, group H, member 3

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013418, Bottlenosed dolphin)

Protein Percentage 97.2%
cDNA percentage 97.59%
Ka/Ks Ratio 0.32133 (Ka = 0.016, Ks = 0.0497)

NR1H3 ENSBTAG00000010681 (Cow)

Gene Details

Oxysterols receptor LXR-alpha

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000014131, Cow)

Protein Percentage 95.8%
cDNA percentage 93.16%
Ka/Ks Ratio 0.08565 (Ka = 0.0223, Ks = 0.2607)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1290 bp    Location:1483572..1495703   Strand:+
>bmy_04126
ATGTCTTTGTGGCTGGAGGCCCCTGTGCCTGATGTTTCTCCTGACTGTGCAGTGGAGCTGTGGGAGCCAGATGCACAAGATGCAAGCAGCCAGCCTCTGGGAAGCAGCAACTGTATCCTCAGGGAGGAATCTAGCACACCCCAATCTGCTAGGGGCACTTCGAGGGTGGGGCTGGAGGCAACAGAGCCCACAGCCCTGCTCCCCGGGGTGGAGGCCCCTCCAGAGTCCACAGGTGAGGAGCTGCTGGATTTGGAGGAGGCTTCCGGCTTCCACTACAACGTGCTGAGCTGCGAGGGCTGCAAGGGATTCTTCCGCCGCAGTGTCATCAAAGGGGCGCGCTACGTCTGCCACAGTGGGGGCCACTGCCCCATGGACACCTACATGCGTCGCAAGTGCCAGGAGTGCCGCCTTCGCAAATGCCGCCAGGCCGGCATGCGGGAGGAGTGTGTTCTGTCAGAAGAACAGATCCGTCTGAAGAAACTGAAGCGGCAAGAGGAGGAACAGGCTCAGGCCACATCCGTGCCCCCGAGGGCTTCCTCTCCGCCCCAAGTCCTGCCCCAGCTCAGCCCGGAGCAGCTGGGCATGATTGAGAAGCTGGTGGCTGCCCAGCAGCAGTGTAACAGACGTTCCTTCTCGGACCGGCTTCGAGTCACGCCCTGGCCCATGGCACCAGATCCGCAGAGTCGGGAGGCCCGTCAGCAACGCTTTGCCCACTTCACGGAGCTGGCCATTGTCTCTGTGCAGGAGATCGTTGATTTTGCCAAACAGCTGCCGGGCTTCCTGCAGCTCAGCCGGGAGGACCAGATTGCCCTCCTGAAGACCTCTGCAATTGAGGTGATGCTTCTGGAGACATCTCGGAGGTACAACCCTGGAAGTGAGAGTATCACCTTCCTCAAGGATTTCAGTTATAACCGGGACGACTTTGCCAAAGCAGGGCTGCAGGTGGAGTTCATCAACCCCATCTTTGAGTTCTCCAGAGCCATGAATGAGCTGCAACTAAATGATGCTGAGTTTGCCTTGCTCATTGCCATCAGCATCTTCTCTGCAGACCGKCCCAACGTGCAGGACCAGCTCCAGGTAGAGAGGCTGCAACACACATATGTGGAGGCCCTGCATGCCTACGTCTCCATCCACCACCCCCATGACCGACTGATGTTCCCACGGATGCTAATGAAACTGGTGAACCTCCGGACACTGAGCAGCGTCCATTCAGAGCAAGTGTTTGCACTGCGCCTGCAGGATAAAAAGCTTCCCCCGCTGCTCTCTGAGATCTGGGATGTGCACGAGTGA

Related Sequences

bmy_04126T0 Protein

Length: 430 aa      View alignments
>bmy_04126T0
MSLWLEAPVPDVSPDCAVELWEPDAQDASSQPLGSSNCILREESSTPQSARGTSRVGLEATEPTALLPGVEAPPESTGEELLDLEEASGFHYNVLSCEGCKGFFRRSVIKGARYVCHSGGHCPMDTYMRRKCQECRLRKCRQAGMREECVLSEEQIRLKKLKRQEEEQAQATSVPPRASSPPQVLPQLSPEQLGMIEKLVAAQQQCNRRSFSDRLRVTPWPMAPDPQSREARQQRFAHFTELAIVSVQEIVDFAKQLPGFLQLSREDQIALLKTSAIEVMLLETSRRYNPGSESITFLKDFSYNRDDFAKAGLQVEFINPIFEFSRAMNELQLNDAEFALLIAISIFSADRPNVQDQLQVERLQHTYVEALHAYVSIHHPHDRLMFPRMLMKLVNLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE*