Sequence detailsbmy_04126 (Coding sequence)

Part of scaffold_127 (SequenceType object (1))

For more information consult the page for scaffold_127 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NR1H3ENSTTRG00000014149 (Bottlenosed dolphin)

Gene Details

nuclear receptor subfamily 1, group H, member 3

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000013418, Bottlenosed dolphin)

Protein Percentage 97.2%
cDNA percentage 97.59%
Ka/Ks Ratio 0.32133 (Ka = 0.016, Ks = 0.0497)

NR1H3ENSBTAG00000010681 (Cow)

Gene Details

Oxysterols receptor LXR-alpha

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000014131, Cow)

Protein Percentage 95.8%
cDNA percentage 93.16%
Ka/Ks Ratio 0.08565 (Ka = 0.0223, Ks = 0.2607)

Additional orthologs identified in other species via the OPTIC pipeline.

NR1H3 (Human)   Nr1h3 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1290 bp    Location:1483572..1495703   Strand:+
Raw sequence 
>bmy_04126
ATGTCTTTGTGGCTGGAGGCCCCTGTGCCTGATGTTTCTCCTGACTGTGCAGTGGAGCTGTGGGAGCCAGATGCACAAGATGCAAGCAGCCAGCCTCTGGGAAGCAGCAACTGTATCCTCAGGGAGGAATCTAGCACACCCCAATCTGCTAGGGGCACTTCGAGGGTGGGGCTGGAGGCAACAGAGCCCACAGCCCTGCTCCCCGGGGTGGAGGCCCCTCCAGAGTCCACAGGTGAGGAGCTGCTGGATTTGGAGGAGGCTTCCGGCTTCCACTACAACGTGCTGAGCTGCGAGGGCTGCAAGGGATTCTTCCGCCGCAGTGTCATCAAAGGGGCGCGCTACGTCTGCCACAGTGGGGGCCACTGCCCCATGGACACCTACATGCGTCGCAAGTGCCAGGAGTGCCGCCTTCGCAAATGCCGCCAGGCCGGCATGCGGGAGGAGTGTGTTCTGTCAGAAGAACAGATCCGTCTGAAGAAACTGAAGCGGCAAGAGGAGGAACAGGCTCAGGCCACATCCGTGCCCCCGAGGGCTTCCTCTCCGCCCCAAGTCCTGCCCCAGCTCAGCCCGGAGCAGCTGGGCATGATTGAGAAGCTGGTGGCTGCCCAGCAGCAGTGTAACAGACGTTCCTTCTCGGACCGGCTTCGAGTCACGCCCTGGCCCATGGCACCAGATCCGCAGAGTCGGGAGGCCCGTCAGCAACGCTTTGCCCACTTCACGGAGCTGGCCATTGTCTCTGTGCAGGAGATCGTTGATTTTGCCAAACAGCTGCCGGGCTTCCTGCAGCTCAGCCGGGAGGACCAGATTGCCCTCCTGAAGACCTCTGCAATTGAGGTGATGCTTCTGGAGACATCTCGGAGGTACAACCCTGGAAGTGAGAGTATCACCTTCCTCAAGGATTTCAGTTATAACCGGGACGACTTTGCCAAAGCAGGGCTGCAGGTGGAGTTCATCAACCCCATCTTTGAGTTCTCCAGAGCCATGAATGAGCTGCAACTAAATGATGCTGAGTTTGCCTTGCTCATTGCCATCAGCATCTTCTCTGCAGACCGKCCCAACGTGCAGGACCAGCTCCAGGTAGAGAGGCTGCAACACACATATGTGGAGGCCCTGCATGCCTACGTCTCCATCCACCACCCCCATGACCGACTGATGTTCCCACGGATGCTAATGAAACTGGTGAACCTCCGGACACTGAGCAGCGTCCATTCAGAGCAAGTGTTTGCACTGCGCCTGCAGGATAAAAAGCTTCCCCCGCTGCTCTCTGAGATCTGGGATGTGCACGAGTGA

Related Sequences

bmy_04126T0 SequenceType object (3)

Length: 430 aa      View alignments
>bmy_04126T0
MSLWLEAPVPDVSPDCAVELWEPDAQDASSQPLGSSNCILREESSTPQSARGTSRVGLEATEPTALLPGVEAPPESTGEELLDLEEASGFHYNVLSCEGCKGFFRRSVIKGARYVCHSGGHCPMDTYMRRKCQECRLRKCRQAGMREECVLSEEQIRLKKLKRQEEEQAQATSVPPRASSPPQVLPQLSPEQLGMIEKLVAAQQQCNRRSFSDRLRVTPWPMAPDPQSREARQQRFAHFTELAIVSVQEIVDFAKQLPGFLQLSREDQIALLKTSAIEVMLLETSRRYNPGSESITFLKDFSYNRDDFAKAGLQVEFINPIFEFSRAMNELQLNDAEFALLIAISIFSADRPNVQDQLQVERLQHTYVEALHAYVSIHHPHDRLMFPRMLMKLVNLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE*