Part of scaffold_127 (Scaffold)

For more information consult the page for scaffold_127 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PU.1 ENSTTRG00000014153 (Bottlenosed dolphin)

Gene Details

Transcription factor

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013422, Bottlenosed dolphin)

Protein Percentage 94.92%
cDNA percentage 95.2%
Ka/Ks Ratio 0.12246 (Ka = 0.0294, Ks = 0.2401)

BT.58934 ENSBTAG00000021709 (Cow)

Gene Details

transcription factor PU.1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000028937, Cow)

Protein Percentage 92.77%
cDNA percentage 91.77%
Ka/Ks Ratio 0.04964 (Ka = 0.0364, Ks = 0.7329)

SPI1  (Minke Whale)

Gene Details

spleen focus forming virus (SFFV) proviral integration oncogene

External Links

Gene match (Identifier: BACU008959, Minke Whale)

Protein Percentage 95.76%
cDNA percentage 95.62%
Ka/Ks Ratio 0.102 (Ka = 0.0244, Ks = 0.2395)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 711 bp    Location:1568812..1556423   Strand:-
>bmy_04129
ATGCCATTTGTGCATAAGCCTTTCCTGCCCTGCCCTCCAGACCATTACTGGGACTTCCACCCCCACCACATGCACAGCGAGTTCGAGAGCTTCCCCGAGAACCACTTCACGGAGCTGCAGAGCGTGCAGGCCCCGCAGCTGCAGCAGCTCTACCGCCACATGGAGCTGGAGCAGATGCACGTGCTCGACACACCCATGGCGCCCACCCACGCCAGCCTTGGCCACCAGGTCTCCTACCTGCCCCGGATGTGCCTCCCGTACCCCTCCCTGTCCCCAGCTCAGCCCAGCTCGGATGAGGAGGAGGGCGAGCGGCAGAGCCCCCCACTGGAGGTGTCTGATGGGGAGGCCGACGGCCTGGAGCCAGGGCCTGGCCTCCTGCACGGGGAGACAGGCAGCAAGAAGAAGATCCGCCTGTACCAGTTCCTGCTGGACCTGCTGCGCAGTGGCGACATGAAGGACAGCATCTGGTGGGTGGACAAGGACAAGGGCACCTTCCAGTTCTCGTCCAAGCACAAGGAGGCGCTGGCGCACCGCTGGGGCATCCAGAAGGGCAACCGCAAGAAGATGACCTACCAGAAGATGGCCCGCGCGCTTCGCAACTACGGCAAGACGGGCGAGGTCAAGAAAGTCAAGAAGAAGCTCACCTACCAGTTCAGCGGGGAGGTGCTGGGCCGCGGGGGCCTGGCCGAGCGGCGCCACCCGCCCCACTGA

Related Sequences

bmy_04129T0 Protein

Length: 237 aa      View alignments
>bmy_04129T0
MPFVHKPFLPCPPDHYWDFHPHHMHSEFESFPENHFTELQSVQAPQLQQLYRHMELEQMHVLDTPMAPTHASLGHQVSYLPRMCLPYPSLSPAQPSSDEEEGERQSPPLEVSDGEADGLEPGPGLLHGETGSKKKIRLYQFLLDLLRSGDMKDSIWWVDKDKGTFQFSSKHKEALAHRWGIQKGNRKKMTYQKMARALRNYGKTGEVKKVKKKLTYQFSGEVLGRGGLAERRHPPH*