Sequence details bmy_04131 (Coding sequence)

Part of scaffold_127 (Scaffold)

For more information consult the page for scaffold_127 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PSMC3 ENSTTRG00000014155 (Bottlenosed dolphin)

Gene Details

proteasome (prosome, macropain) 26S subunit, ATPase, 3

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013424, Bottlenosed dolphin)

Protein Percentage 98.8%
cDNA percentage 97.52%
Ka/Ks Ratio 0.10548 (Ka = 0.0097, Ks = 0.0922)

BT.49089 ENSBTAG00000021744 (Cow)

Gene Details

26S protease regulatory subunit 6A

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000028983, Cow)

Protein Percentage 99.76%
cDNA percentage 94.33%
Ka/Ks Ratio 0.00273 (Ka = 0.001, Ks = 0.3628)

Additional orthologs identified in other species via the OPTIC pipeline.

PSMC3 (Human)   Psmc3 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1395 bp    Location:1612396..1606380   Strand:-
Raw sequence 
>bmy_04131
ATGGCGACCGTCTGGGATGAGGCTGAGCAAGATGGAATCGGGGAGGAGGTACTCAAGATGTCCACAGAAGAGATCATCCAGCGCACACGGCTGCTGGACAGTGAAATCAAGATCATGAAGAGCGAAGTGTTGCGAGTCACCCACGAACTCCAAGCCATGAAGGACAAAATCAAAGAGAACAGTGAGAAAATCAAAGTGAACAAGACTCTGCCGTACCTGGTCTCCAACGTCATCGAGCTTCTAGATGTTGATCCCAACGATCAAGAGGAAGATGGTGCCAATATTGACCTGGATTCCCAGAGGAAGGGCAAGTGTGCAGTGATCAAAACCTCTACACGACAGACATACTTCCTGCCTGTGATTGGGTTGGTGGATGCTGAAAAGCTGAAGCCAGGAGACTTGGTGGGTGTGAACAAAGACTCCTATCTGATCCTGGAGACCCTGCCCACAGAGTACGACTCGCGTGTGAAGGCCATGGAGGTGGACGAGAGGCCCACAGAGCAATACAGTGACATCGGGGGCCTGGATAAGCAGATTCAGGAGCTGGTGGAGGCCATCGTCCTGCCAATGAACCACAAAGAGAAGTTTGAGAACTTAGGGATCCAGCCTCCAAAGGGGGTGCTAATGTACGGGCCCCCAGGTACGGGGAAGACCCTGCTGGCCCGGGCCTGTGCTGCACAGACCAAGGTGAGTGCTTTGGGAGGGATGAGGAGGAGATGGGCGGGAGCTAAAGCTCTGCCAATGGGCTCAAATCGAAGGGGCTTCTCATCGTGCCTTTGGCCTGATCTGTCAACCCCACCCCCACCCCAGGCCACCTTCCTGAAGCTGGCTGGCCCCCAGCTGGTGCAGATGTTCATTGGGGATGGTGCCAAGCTAGTCCGGGATGCATTTGCCCTGGCCAAGGAGAAAGCTCCATCCATCATCTTCATTGATGAGCTGGATGCCATCGGCACCAAGCGCTTTGACAGTGAGAAGGCCGGGGACCGGGAGGTGCAGAGGACGATGCTGGAGCTTCTGAACCAGCTGGACGGGTTCCAGCCGAACACCCAAGTGAAGGTAATTGCAGCCACTAACAGGGTGGACATCCTGGACCCTGCCCTGCTCCGCTCAGGCCGCCTGGACCGCAAGATCGAGTTCCCGATGCCCAACGAGGAGGCCCGGGCCAGAATCATGCAGATCCACTCCCGAAAGATGAATGTCAGTCCTGATGTGAACTACGAGGAGCTGGCCCGCTGTACAGATGACTTCAACGGGGCCCAGTGCAAGGCCGTGTGTGTGGAGGCGGGCATGATCGCGCTGCGCAGGGGCGCCACAGAGCTCACTCACGAGGACTACATGGAGGGCATCCTGGAGGTACAGGCCAAGAAGAAAGCCAACCTGCAGTACTACGCCTAA

Related Sequences

bmy_04131T0 Protein

Length: 465 aa      View alignments
>bmy_04131T0
MATVWDEAEQDGIGEEVLKMSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKVSALGGMRRRWAGAKALPMGSNRRGFSSCLWPDLSTPPPPQATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQYYA*