Part of scaffold_127 (Scaffold)

For more information consult the page for scaffold_127 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PTPMT1 ENSBTAG00000018479 (Cow)

Gene Details

protein-tyrosine phosphatase mitochondrial 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000039412, Cow)

Protein Percentage 80.37%
cDNA percentage 86.54%
Ka/Ks Ratio 0.28139 (Ka = 0.1056, Ks = 0.3754)

PTPMT1  (Minke Whale)

Gene Details

protein tyrosine phosphatase, mitochondrial 1

External Links

Gene match (Identifier: BACU008963, Minke Whale)

Protein Percentage 99.27%
cDNA percentage 99.03%
Ka/Ks Ratio 0.09395 (Ka = 0.0032, Ks = 0.0337)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1044 bp    Location:1715029..1719640   Strand:+
>bmy_04134
ACAGTTTCACACGCAGGGGTCAGAGACCTCCTCACCTGGAGTCACAGCCCCCTCCCTCGGGAGGGGGGTCAATGGCACAGGCAGCGGTCACAGTTTCACACGCGGGAGACTCACAACCTTGGACCGAGGACGCGCCCTTCCTCGTCAGGGGTCCCAGTCTCCCGCCCGGGAAGCCTTGGTCCCTCCCCCGAGGCCGGCAGCCCCTCCTCCCGTGACATGGTGCCGGTCCCACTGGGCCCAGGCTCTCCCGAAGTGTCCCTGGGGGCCGGGCCCGAGGTCTCGGCGCTCAAGAGGCCCGCGCCGGCCGTATCGCCTTCGCTGGAGGCCGCGGACGACTCGCAGTCCTCGGCCTCGTCGCTCTTCTGGCCCTCCTCGCGGCCGCCCCCCGCGAGCCCGGGAGTGGGCAGGTCGTCGCTGCGCCGGGCCGGGTGGGGCAGGATGGCGGCCGGCACGTTGCTGGAGGCCGGCCTGGCCCGGGTGCTCTTCTACCCGACGCTGCTGTACACACTGTTCCGCGGTAAGATGCCGGGCCCGGCGCACCGCGACTGGTACAACCGTATCGACAACACGGTGCTGCTGGGCGCGCTGCCGCTGCGGAACATGACTCGCCGGCTGGTACAGGACGAGAACGTGCGAGGGCTGATCACCATGAACGAGGAGTATGAGACGAGGTTCCTGTGCAACTCCCCAAAGGAGTGGAAGAATGTAGGAGTCGAGCAGCTGCGGCTCAGCACGATAGACATGACTGGAGTCCCAACCTTGGCTAACCTCCAGAAAGGAGTCCAGTTTGCTCTCAAGTACCAGTCGCTAGGCCAGTCTGTCTACGTGCATTGTAAGGCTGGGCGTTCCAGAAGTGCCACTATGGTGGCAGCATATCTGATTCAGGTGTACAACTGGACTCCAGAGGAGGCCGTAAGAGCCATCACCAAGATCCGGTCACACATCTACATCAGACCTGGCCAGCTGGAAGTTCTCAAAGAGTTCCACAAGGTGATCACTGCAGGAGCAGCAAAGAATGAGACTTGTCACACATCACAGACGTGA

Related Sequences

bmy_04134T0 Protein

Length: 348 aa      View alignments
>bmy_04134T0
TVSHAGVRDLLTWSHSPLPREGGQWHRQRSQFHTRETHNLGPRTRPSSSGVPVSRPGSLGPSPEAGSPSSRDMVPVPLGPGSPEVSLGAGPEVSALKRPAPAVSPSLEAADDSQSSASSLFWPSSRPPPASPGVGRSSLRRAGWGRMAAGTLLEAGLARVLFYPTLLYTLFRGKMPGPAHRDWYNRIDNTVLLGALPLRNMTRRLVQDENVRGLITMNEEYETRFLCNSPKEWKNVGVEQLRLSTIDMTGVPTLANLQKGVQFALKYQSLGQSVYVHCKAGRSRSATMVAAYLIQVYNWTPEEAVRAITKIRSHIYIRPGQLEVLKEFHKVITAGAAKNETCHTSQT*