Part of scaffold_125 (Scaffold)

For more information consult the page for scaffold_125 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

FGD3 ENSTTRG00000000313 (Bottlenosed dolphin)

Gene Details

FYVE, RhoGEF and PH domain containing 3

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000294, Bottlenosed dolphin)

Protein Percentage 91.22%
cDNA percentage 93.12%
Ka/Ks Ratio 0.37238 (Ka = 0.0213, Ks = 0.0573)

FGD3 ENSBTAG00000006939 (Cow)

Gene Details

FYVE, RhoGEF and PH domain-containing protein 3

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000009131, Cow)

Protein Percentage 87.89%
cDNA percentage 91.03%
Ka/Ks Ratio 0.2458 (Ka = 0.0611, Ks = 0.2485)

FGD3  (Minke Whale)

Gene Details

FYVE, RhoGEF and PH domain containing 3

External Links

Gene match (Identifier: BACU009576, Minke Whale)

Protein Percentage 95.49%
cDNA percentage 96.9%
Ka/Ks Ratio 0.5387 (Ka = 0.0269, Ks = 0.0499)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2289 bp    Location:1807196..1843356   Strand:+
>bmy_04153
ATGCTCCATCCACCCGCAGACCTCTATGACCTGCCTGGGGAACCTCCTGAACTGCTCCACTTCAAAACTGCTGGGCAAGAAAAAGATTTTCAGCAAATCCCCCCAGCCCCCCAACCCTGTGCAAGGCCTGGGCTGGCCAACTCAAACGACCTGGAACGCAGCCAGCAGGGAACCTGGCACCCAGCCTTCCACCTCAGTGTCCTTGTGGAGTCTGACAGCCTCAGGAAGCCCCCAGCCAGCCCCTCAAAGAGCTCAGAGAACTCAACTCTGAGGATGGAGCCAGGAGGGGGGTCCTCAATGCCCCCAGCCCCCATTGCCACCCGGGGGGAGCCAGAAGCTGGGCCTAGCAGCTCCTCCCTGGAGCATCCAAGCACAGACCCAGGGAAGCTCCGAGCGCTCCCTGTTGGGCCTGGAGCCCACTGCGGGGACCCTGCCTCCGGGAGCCCTGGCAGCCAGGCCTCTGCGGGGGACATGGGCTCTGTGGGTGAGCCCAGCAGCGGCACTAAGATCCCTAACCGGGACAGCGGGATAGACAGCCCTTCCTGCAGCGTGGTTGGCGAGCACTTCTCCTGCGAGGACGGCAGCGAGGCGGGCCCAGGCCCCACCATCAAAGGCCTGCACCTGGAGACAGCCCCAGGTGGCAAGGCCCCACAGGAGGAGGCTGATAGCGATATGGGCGAGGGCAGCAGTGAGGAGCCAGACCCCGAGAATAGCCCCTTGAGGGCTGACGCGGATCCAGCCAAGTGCTCTGAGCCCCAGAAGCTGCTCCACATTGCCCAGGAGCTGCTGCACACTGAGGAGACCTACGTGAAGCGTCTGCACCTGCTAGACCAGAACTTTGACCGGGCCGTGGAGCTGGTGAGCACCTGGACCCAGCGCTCACTGGTATTTAAGGACATTGTCCAAGGCATCCAGAAGCAGGAGATGTGCGGAAACCTGACGCTGCAGCACCATATGCTGGAGCCCGTGCAGAGGGTCCCCCGCTATGAGCTGCTGCTCAAGGACTATCTGAAGAGGCTCCCAGAGGATGCCCCAGACTGGAAGGATGCAGAGAGATCCTTGGAGCTCATCTCCACAGCTGCCAACCACTCCAACGCTGCCATTCGGAAAACGGAGAAAATGCACAAGCTCTTGGAGGTGTACGAGAGACTGGGTGGGGAGGAGGACATCGTCAACCCTGCGAACGAGCTGATCAAGGAGGGCCACATCCAGAAGCTATCAGCCAAGAATGGCACGACCCAGGACCGCCACCTCTTCCTGTTCAACAGCATGATCCTTTACTGTGTGCCCAAACTGCGGCTCATGGGCCAGAAGTTCAGTGTCCGGGAGAAGATGGACATTTCTGGCCTCCAGGTGCAGGATGTCGTCAAGTCAAATGCAGCCCACACATTCATCATAACTGGAAAGAAAAGGTCCCTGGAGCTACAAACTCGGACAGAAGAGGAAAAGAAAGAATGGATTCAGGTCATTGAGGCCACCATTGAGAAGCACAAGCAGAACAGCCAGACTTTCAAGGCCTTCAGTGGCTCCTTCGGCCAGGATGAGGATTCCTCCCTCACTCCAGACCCGCCTATGGTGAGCGGCAACTCAGAGGTGCCTGCAGTGGTAGCCACTGGTGGAGGGGGTGCTGCAGGGCTTGAGCCCAGGAGAGGGTCCTCTAAGACCCGACGTGACAAGGAGAAGCAGGGCTGCAGCAGCTGCRGTGAGACCTTCAACTCCATCACCAAAAGGAAGCACCACTGCAAGTTGTGCGGGGCGGTCATCTGTGGGAAGTGCTCCGAGTTCAAGGCCGAGAACGGCAGGCAGAGCCGTGTCTGCCGAGAGTGTTTCCTGACCCAGCCGGTGGCCCCCTCGAGCCCCAGCCTCGAGGAGCCCTTGGAGCCCAAGCAGAGCACAGAGAAGCCAGCCACTGTGGACCCCCTGCCCAGCCTGCTCTGTGGCCCCCTGCAGGTGTCGGATGGCGGCACAGCCTGGAGCAAGGTGTGGGCTGCCATCTCTGAGTCGGACTCCCTGGAGTTGGTGCTGCACCTTCGAGGAGGCAGCCAGGATGGCCAGCTGCTGCATGCCATCCCCCTCTCTGGCTGGAGGGTGAGTGTGCCAGACCCCGCAGAGAGACTGGATGCTGGACACGTGTGGCAGCTGCAGCAGGCCCAGCAGTCTTTGTACCTGAGTGCCCCATCCGCCAAGCTGCAGCAGCAGTGGTTGGAGGCCCTGCGCTCAGCAGCCCACGGGCACCCGGCCCAGGCCAGCCCGGGGGCCCAGCAGCCCCAGGCCCCAGCTGCCCCATGA

Related Sequences

bmy_04153T0 Protein

Length: 763 aa      View alignments
>bmy_04153T0
MLHPPADLYDLPGEPPELLHFKTAGQEKDFQQIPPAPQPCARPGLANSNDLERSQQGTWHPAFHLSVLVESDSLRKPPASPSKSSENSTLRMEPGGGSSMPPAPIATRGEPEAGPSSSSLEHPSTDPGKLRALPVGPGAHCGDPASGSPGSQASAGDMGSVGEPSSGTKIPNRDSGIDSPSCSVVGEHFSCEDGSEAGPGPTIKGLHLETAPGGKAPQEEADSDMGEGSSEEPDPENSPLRADADPAKCSEPQKLLHIAQELLHTEETYVKRLHLLDQNFDRAVELVSTWTQRSLVFKDIVQGIQKQEMCGNLTLQHHMLEPVQRVPRYELLLKDYLKRLPEDAPDWKDAERSLELISTAANHSNAAIRKTEKMHKLLEVYERLGGEEDIVNPANELIKEGHIQKLSAKNGTTQDRHLFLFNSMILYCVPKLRLMGQKFSVREKMDISGLQVQDVVKSNAAHTFIITGKKRSLELQTRTEEEKKEWIQVIEATIEKHKQNSQTFKAFSGSFGQDEDSSLTPDPPMVSGNSEVPAVVATGGGGAAGLEPRRGSSKTRRDKEKQGCSSCXETFNSITKRKHHCKLCGAVICGKCSEFKAENGRQSRVCRECFLTQPVAPSSPSLEEPLEPKQSTEKPATVDPLPSLLCGPLQVSDGGTAWSKVWAAISESDSLELVLHLRGGSQDGQLLHAIPLSGWRVSVPDPAERLDAGHVWQLQQAQQSLYLSAPSAKLQQQWLEALRSAAHGHPAQASPGAQQPQAPAAP*