Part of scaffold_129 (Scaffold)

For more information consult the page for scaffold_129 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

FMR1 ENSTTRG00000000613 (Bottlenosed dolphin)

Gene Details

fragile X mental retardation 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000576, Bottlenosed dolphin)

Protein Percentage 99.33%
cDNA percentage 99.27%
Ka/Ks Ratio 0.16622 (Ka = 0.0031, Ks = 0.0186)

FMR1 ENSBTAG00000012552 (Cow)

Gene Details

fragile X mental retardation 1 protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000016665, Cow)

Protein Percentage 97.31%
cDNA percentage 96.36%
Ka/Ks Ratio 0.09605 (Ka = 0.012, Ks = 0.125)

FMR1  (Minke Whale)

Gene Details

fragile X mental retardation 1

External Links

Gene match (Identifier: BACU007775, Minke Whale)

Protein Percentage 92.68%
cDNA percentage 93.82%
Ka/Ks Ratio 0.61906 (Ka = 0.0581, Ks = 0.0939)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2133 bp    Location:1165779..1202086   Strand:+
>bmy_04158
GCGGCTGGAGCTTTCGGCCTCAGTCAGGCGCTCCGCTCCGTTTCGGTTTCACTTCCGGTGAGGGGCCGCCTCGGAGCGGGCGGTGAGCCGACGGCGAGCGCAGGCGGCGGCGGTGACTGCGGCGCCGCTGCCGGGGGGCGTGCAGCAGCGCGGCGGCAGCGGCGGCTGGGCCTCGAGCGCCCGCAGCCCACCTCTCAGGGGCGGGCTCCCGGAGCGATCAGGGCGGACGAGAAGATGGAGGAGCTGGTGGTGGAAGTGCGGGGCTCCAATGGCGCTTTCTACAAGGCATTTGTAAAAGATGTTCATGAAGATTCAATAACAGTGGCATTTGAAAACAACTGGCAGCCAGAGAGGCAGATTCCATTCCATGATGTGAGATTCCCACCACCTGTAGGTTATAATAAAGATATAAATGAAAGCGATGAAGTTGAGGTTTATTCCAGAGCAAATGAAAAAGAGCCTTGCTGTTGGTGGTTAGCTAAAGTGAGGATGATAAAGGGTGAGTTTTATGTGATAGAATATGCAGCATGTGATGCTACATACAATGAAATTGTCACAATTGAACGTTTACGATCAGTTAATCCCAACAAACCTGCCACAAAAGATACTTTCCATAAAATCAAACTGGACGTGCCAGAAGACTTACGACAAATGTGTGCCAAAGAATCGGCACATAAGGACTTTAAAAAGGCAGTTGGTGCCTTTTCTGTAACTTATGATGCAGAAAACTATCAGCTTGTCATTTTGTCTATCAATGAAGTCACCTCAAAGCGCGCACACATGCTGATTGACATGCACTTTCGGAGTCTGCGGACTAAGCTGTCTCTGATACTGAGAAATGAAGAAGCCAGTAAGCAGCTAGAGAGTTCAAGGCAACTTGCCTCAAGGTTTCACGAACAGTTTATCGTACGAGAAGATCTGATGGGTCTAGCTATTGGTACTCATGGTGCTAATATTCAGCAAGCTAGAAAGGTACCTGGGGTCACGGCTATCGATCTAGATGAAGATACCTGCACATTTCATATTTATGGGGAGGATCAGGATGCAGTGAAAAAGGCTCGAAGCTTTCTGGAATTTGCTGAAGATGTCATACAAGTTCCAAGGAACTTAGTAGGCAAAGTAATAGGAAAAAATGGAAAACTGATTCAGGAGATTGTGGACAAGTCAGGAGTTGTGAGGGTGAGAATTGAAGCTGAAAATGAGAAAAATGTTCCACAAGAAGAGGAAATTATGCCACCAAATTCCCTACCTTCCAGTAACTCAAGGGTTGGACCTACTCCTTCAGAAGAAAAAAAGCATATAGATGTAAAGGAAAACAGCACTCATTTTTCTCAGCCTAACAGCACAAAAGTCCAGAGGGTGTTAGTGGTTTCATCAACTGTAGCAGGGGAATCCCAGAAACCTGAACTCAAGGCTTGGCAGGGTATGGTACCATTTGTTTTTGTGGGAACAAAAGACAGCATCGCTAATGCCACTGTTCTTCTGGATTATCACCTGAACTATTTAAAGGAAGTAGACCAGTTGCGTTTGGAGAGATTACAAATTGATGAGCAATTGCGACAGATTGGAGCTAGTTCTAGACCACCACCAAATCGTACAGATAAGGAAAAAGGCTATGTGACTGATGATGGTCAAGGAATGGGTCGAGGTAGTAGACCTTACAGAAATAGGGGGCACGGCAGACGCGGTCCTGGATATACTTCAGGAACTAATTCTGAAGCATCAAATGCTTCTGAAACAGAATCTGACCACAGAGATGAACTCAGTGATTGGTCATTAGCTCCAACAGAGGAAGAGAGGGAGAACTTCCTGCGCAGAGGAGACGGGCGACGGCGTGGAGGTGGAGGAAGAGGACAGGGAGGAAGAGGACGCGGAGGCGGCTTCAAAGGAAACGATGATCACTCCCGAACAGATAATCGTCCGCGTAATCCAAGAGAGGCTAAAGGAAGAACAGCAGATGGATCCCTCCAGATCAGAGTTGACTGCAATAATGAAAGGAGTGTCCACACTAAAACATTACAGAATACCTCCAGTGAAGGTAACCGGCTGCGCACGGGTAAAGATCGTAACCAGAAGAAGGAAAAGCCAGACAGCGTGGATGGTCAGCAACCACTTGTGAATGGAGTACCCTAA

Related Sequences

bmy_04158T0 Protein

Length: 711 aa      View alignments
>bmy_04158T0
AAGAFGLSQALRSVSVSLPVRGRLGAGGEPTASAGGGGDCGAAAGGRAAARRQRRLGLERPQPTSQGRAPGAIRADEKMEELVVEVRGSNGAFYKAFVKDVHEDSITVAFENNWQPERQIPFHDVRFPPPVGYNKDINESDEVEVYSRANEKEPCCWWLAKVRMIKGEFYVIEYAACDATYNEIVTIERLRSVNPNKPATKDTFHKIKLDVPEDLRQMCAKESAHKDFKKAVGAFSVTYDAENYQLVILSINEVTSKRAHMLIDMHFRSLRTKLSLILRNEEASKQLESSRQLASRFHEQFIVREDLMGLAIGTHGANIQQARKVPGVTAIDLDEDTCTFHIYGEDQDAVKKARSFLEFAEDVIQVPRNLVGKVIGKNGKLIQEIVDKSGVVRVRIEAENEKNVPQEEEIMPPNSLPSSNSRVGPTPSEEKKHIDVKENSTHFSQPNSTKVQRVLVVSSTVAGESQKPELKAWQGMVPFVFVGTKDSIANATVLLDYHLNYLKEVDQLRLERLQIDEQLRQIGASSRPPPNRTDKEKGYVTDDGQGMGRGSRPYRNRGHGRRGPGYTSGTNSEASNASETESDHRDELSDWSLAPTEEERENFLRRGDGRRRGGGGRGQGGRGRGGGFKGNDDHSRTDNRPRNPREAKGRTADGSLQIRVDCNNERSVHTKTLQNTSSEGNRLRTGKDRNQKKEKPDSVDGQQPLVNGVP*