Part of scaffold_130 (Scaffold)

For more information consult the page for scaffold_130 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CDH11 ENSTTRG00000001985 (Bottlenosed dolphin)

Gene Details

cadherin 11, type 2, OB-cadherin (osteoblast)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001862, Bottlenosed dolphin)

Protein Percentage 65.23%
cDNA percentage 64.85%
Ka/Ks Ratio 0.01962 (Ka = 0.2493, Ks = 12.705)

CDH11 ENSBTAG00000032092 (Cow)

Gene Details

cadherin-11 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000042902, Cow)

Protein Percentage 65.49%
cDNA percentage 64.81%
Ka/Ks Ratio 0.01907 (Ka = 0.2458, Ks = 12.8917)

CDH11  (Minke Whale)

Gene Details

cadherin 11, type 2, OB-cadherin (osteoblast)

External Links

Gene match (Identifier: BACU018074, Minke Whale)

Protein Percentage 64.85%
cDNA percentage 64.69%
Ka/Ks Ratio 0.02006 (Ka = 0.2516, Ks = 12.5415)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2550 bp    Location:1388456..1023487   Strand:-
>bmy_04173
ATGCCAGAACGGCTAGCGGAAATGCTGTTGGATCTCTGGACTCCATTAATAATATTATGGATTACTCTTCCCCCTTCCATTTACACGGCTCCGATGAATCAGTCTCCAGTTTTAAAGAGTGGATCCCCTTTGGAACTAAACAGGCTGAGTGAAGAACAGCGGATTTTGAACCGTTCCAAGAGGGGCTGGGTTTGGAATCAAATGTTCGTCCTGGAAGAGTTTTCTGGACCTGAACCGATCCTTGTTGGCCGGGTATACAAGTATGAGTTCGTGGTCAAGATGGGGAAAGAGTTACATACAGACCTGGATCCTGGGAGCAAAAAAATCAAATATATCCTATCAGGCGATGGAGCTGGGACCATCTTTCAAATAAATGACATAACAGGAGATATCCATGCTATAAAAAGACTTGACCGAGAGGAAAAAGCTGAGTACACCCTAACAGCTCAGGCAGTGGACTGGGAGACAAATAAGCCTCTTGAGCCTCCTTCTGAATTTATTATCAAAGTTCAAGACATCAACGACAATGCACCAGAGTTCCTCAGTGGACCCTATCATGCTACCGTGCCAGAGATGTCCATTTTGGAGGGCCTGCTGCTGTTTCTTAAGATCTTTGGAAGTGACGAGAACGAGGCCCATGGAATCCCCTGCTCAGAAGTCAAGTCATGTACGTCTGTCACTAATGTAACAGCTACTGATGCTGATGACCCAGTTTATGGAAACAGTGCGAAGTTGGTTTATAGTATCTTGGAAGGGCAACCTTATTTTTCCATTGAGCCTGAAACAGCAATTATAAAAACTGCCCTTCCCAATATGGACAGAGAAGCCAAGGAGGAGTACGTGGTTGTTATCCAAGCCAAAGATATGGGTGGACACTCGGGCGGCCTGTCTGGAACCACAACACTTACAGTGACCCTCACTGACGTGAATGACAATCCTCCAAAATTTGCCCAGAGAGAAGCCACATACACTGTAACTGTATTTTGCCTAGAGAGTTTTGAAGTACCAGAAGATGTGGTTCTTGGCACTGCCATAGGGAGGGTGAAGGCCAATGATCAGGATATTGGTGAAAATGCACAGTCGTCATATGACATCATTGACGGAGATGGAACAGCACTCTTTGAAATCACTTCTGATGCCCAGGCCCAGGATGGCATTATAAGACTGAGAAAGCCTCTGGATTTTGAGACCAAAAAATCCTATACGCTGAAGGTAGAGGCAGCCAATGTCCACACTGACCCGCGTTTCAGCAGCAGGGGGCCCTTTAAAGACACGGCGACAGTCAAAATTGTTGTCGAAGATGCAGATGAGCCTCCAGTCTTCTCTTCACCGACTTACCTCCTCGAAGTTCATGAAAATGCTGCTCTCAACTCCGTGATTGGGCAAGTGACCGCTCGTGACCCCGACATCACGTCCAGTCCTATAAGGTTTTCCATCGACCGGCACACCGACCTGGAGAGACAGTTCAACGTTAATGCAGATGATGGGAAGATAACGCTTGCAACACCGCTTGACAGGGAATTAAGCATGTGGCACAACATAACAATCATTGCTACCGAAATCAGGAACCACAGTCAGATATCCCGAGTACCTGTTGCTATTAAAGTGCTGGATGTCAATGACAACGCCCCTGAATTCGCATCCGAATATGAGGCATTTTTATGTGAAAATGGAAAACCCGGCCAAGTCATTCAAACAGTGAGTGCCATGGACAAAGATGATCCCAAAAACGGACATTATTTCTTATACAGTCTTCTTCCAGAAATGGTCAACAATCCGAATTTTACCATCAAGAAAAATGAAGATAATTCCCTCAGCATTTTGGCAAAGCATAATGGATTCAACCGCCAGAAGCAAGAAGTCTATCTTTTACCAATCATAATCAGTGATAGTGGGAATCCTCCTCTGAGCAGCACCAGTACCCTGACCATCCGGGTCTGTGGCTGCAGCAGTGATGGTGTTGTCCAGTCTTGTAATGTTGAAGCTTATGTACTTCCGATTGGACTCAGTATGGGCGCCTTAATTGCCATATTAGCATGCATCATTTTGCTGCTAGTCATCGTGGTGCTGTTTGTAACTCTGCGGCGACATAAAAACGAGCCATTAATTATCAAAGATGATGAAGATGTGCGAGAAAACATCATTCGCTACGATGACGAAGGAGGAGGGGAAGAAGACACGGAGGCTTTTGACATTGCAACTTTACAAAACCCAGATGGAATTAACGGATTTTTACCCCGTAAAGATATTAAACCAGATTTGCAGTTTATGCCAAGGCAAGGGCTTGCTCCAGTTCCGAGCGGTGTTGATGTGGATGAATTTATAAATGTGCGGCTACACGAGGCAGATAACGACCCCACAGCCCCACCATATGACTCCATTCAGATTTATGGCTATGAAGGCCGAGGGTCCGTGGCTGGCTCCCTCAGCTCCTTGGAATCCACCACCTCAGACTCGGATCAGAACTTTGACTACCTCAGTGACTGGGGTCCCCGCTTTAAGAGACTGGGCGAACTCTACTCCGTCGGTGAAAGTGACAAAGAAACTTGA

Related Sequences

bmy_04173T0 Protein

Length: 850 aa      View alignments
>bmy_04173T0
MPERLAEMLLDLWTPLIILWITLPPSIYTAPMNQSPVLKSGSPLELNRLSEEQRILNRSKRGWVWNQMFVLEEFSGPEPILVGRVYKYEFVVKMGKELHTDLDPGSKKIKYILSGDGAGTIFQINDITGDIHAIKRLDREEKAEYTLTAQAVDWETNKPLEPPSEFIIKVQDINDNAPEFLSGPYHATVPEMSILEGLLLFLKIFGSDENEAHGIPCSEVKSCTSVTNVTATDADDPVYGNSAKLVYSILEGQPYFSIEPETAIIKTALPNMDREAKEEYVVVIQAKDMGGHSGGLSGTTTLTVTLTDVNDNPPKFAQREATYTVTVFCLESFEVPEDVVLGTAIGRVKANDQDIGENAQSSYDIIDGDGTALFEITSDAQAQDGIIRLRKPLDFETKKSYTLKVEAANVHTDPRFSSRGPFKDTATVKIVVEDADEPPVFSSPTYLLEVHENAALNSVIGQVTARDPDITSSPIRFSIDRHTDLERQFNVNADDGKITLATPLDRELSMWHNITIIATEIRNHSQISRVPVAIKVLDVNDNAPEFASEYEAFLCENGKPGQVIQTVSAMDKDDPKNGHYFLYSLLPEMVNNPNFTIKKNEDNSLSILAKHNGFNRQKQEVYLLPIIISDSGNPPLSSTSTLTIRVCGCSSDGVVQSCNVEAYVLPIGLSMGALIAILACIILLLVIVVLFVTLRRHKNEPLIIKDDEDVRENIIRYDDEGGGEEDTEAFDIATLQNPDGINGFLPRKDIKPDLQFMPRQGLAPVPSGVDVDEFINVRLHEADNDPTAPPYDSIQIYGYEGRGSVAGSLSSLESTTSDSDQNFDYLSDWGPRFKRLGELYSVGESDKET*