Part of scaffold_132 (Scaffold)

For more information consult the page for scaffold_132 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CASC1 ENSTTRG00000012589 (Bottlenosed dolphin)

Gene Details

cancer susceptibility candidate 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011951, Bottlenosed dolphin)

Protein Percentage 75.57%
cDNA percentage 76.23%
Ka/Ks Ratio 0.31718 (Ka = 0.0155, Ks = 0.0489)

CASC1 ENSBTAG00000002972 (Cow)

Gene Details

Cancer susceptibility candidate protein 1 homolog

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000050480, Cow)

Protein Percentage 81.5%
cDNA percentage 86.24%
Ka/Ks Ratio 0.48405 (Ka = 0.1274, Ks = 0.2632)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1125 bp    Location:1655887..1641613   Strand:-
>bmy_04180
ATGAAATTATTAAGTGAAACAGTTTCAGCAGCGCAGTTGTTGCTGTTAGAGAATGCCCCTGAAAAGCCATATTTCTCTGAAGAAAATGAGGTTGATTTATGCCAATTCACAGCTCTGGGTGGAGTGCACCACTTGGATATTTTGGAGCTTCCTCCACAGTGTAAACCAAGGAAGGGCTGGATGATTGTGGAAATACTCAAAGAAGGATTACAGAAATATACATATCCTCCAGAAACTGCAGAAGACTTTGAAACAGAAAACGCTTTCCCACCCATAGAGGTCATGCTTGAGGTTCATGAGAACGTAATCTTTTTTGAGAATCCTGTGGTTGCAAGGTGGGATGCTGAAGGTAAACACTGGAAAACTGATGGCATCAGCAATGTATCTTACAAATCRGAAGACAGACTTATAACATTCAGCCTGGAAACTTTGGGCCCTGTTACCTTGATTCAAGATGCTCACGTTAATATGCCATACCAGTCATGGGAGCTAAGACCACTTGATGTGAATAAAGTACTTCTGACTGTGACTACAGTATTTACTGAGATTCAAATACAAATTAAGGAAAACCTCTGCATGTTAGCGTCAATCAAACTAAATAACAAAAAGCATTCATCTATTTTGGAAGAAAAGTGGATGACTCCTGTTTCTTTCATTATTGCTTTGAAAGAAGCTGGACTGAATATCTTCCCTACTGGACACTCTCACTTTTATGTTGTCATAAACTATAAGCTTCCTTTGGTAGAAGTGAAAGCTTATCGACAAATGGCCCTGCTAAGTTCTGCTTTTGCGTTTGGCTGGAGCAAGTGGAATACAGTATGTGATTCTAAAAAAGTTGTGTTTCAGGTGAGGGAACACCTTCCTAAAGAAGAACCCATTCAAAATCCTAATTGGACCCTTTTAATGTTTAGTGGTGATAGGGCACAAAGTCTCAAAATCAATGAATCCAGTGATGCATTCTCTGAAGCCCTTAAAGAAGAAACTGAGTTTCATTCTACTTTATATCACATGGTTAAGGATTTTGCTTCTAAAGAAGCAATGAAGAAAGTTAGGTGTTCCAACTGCCAGTTTGTTGACTCTGTATGCCACATGCTACTCTCAACTAGATTACTCAGCTATTCTTAA

Related Sequences

bmy_04180T0 Protein

Length: 375 aa      View alignments
>bmy_04180T0
MKLLSETVSAAQLLLLENAPEKPYFSEENEVDLCQFTALGGVHHLDILELPPQCKPRKGWMIVEILKEGLQKYTYPPETAEDFETENAFPPIEVMLEVHENVIFFENPVVARWDAEGKHWKTDGISNVSYKSEDRLITFSLETLGPVTLIQDAHVNMPYQSWELRPLDVNKVLLTVTTVFTEIQIQIKENLCMLASIKLNNKKHSSILEEKWMTPVSFIIALKEAGLNIFPTGHSHFYVVINYKLPLVEVKAYRQMALLSSAFAFGWSKWNTVCDSKKVVFQVREHLPKEEPIQNPNWTLLMFSGDRAQSLKINESSDAFSEALKEETEFHSTLYHMVKDFASKEAMKKVRCSNCQFVDSVCHMLLSTRLLSYS*